Gene Sfri_3668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3668 
Symbol 
ID4280561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp4349616 
End bp4350758 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content45% 
IMG OID638136481 
Productgalactokinase 
Protein accessionYP_752334 
Protein GI114564820 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0153] Galactokinase 
TIGRFAM ID[TIGR00131] galactokinase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAACC CTGCTCAACG CGCCACTAAA TTATTTGTTC GAACATTTGG CACTAAACCA 
GATGATTTAT ACCAAGCGCC CGGGCGAGTT AACATTATGG GCGAACATAC CGACTATAAC 
GAAGGCCTCG CATTACCCGC TGCAATTAAC TTTCATACTG TTATAGCGGT AAAGCATCGC 
GATGATAATT TATTTCGCGC GGTGACAACC GCTTTCCCTG GGGAAATTAA GCAATGGCAC 
TTTGGTGAAG AAGGCCCAGT CGCTGCAGGC GATGACTGGA GCCATTATCT CAAAAGTGTA 
ACCGCTGCTA TGAACCAATC GGGTTTACGA GCTAAGGGCT TAGACTTAGC CATTGTGGGT 
GACGTACCAC TGGGAGCCGG TTTATCATCG TCGGCAGCAC TGGAAATCGC TTTTGGTACC 
GCCATCAGTT ATGCCAGCCA ATTAAACTTA TCTCCTATCG CTATTGCCCA ATTAGCTCAA 
CGCGGCGAAA GTCAATTTAT GCTGTTAGAT TGCGGCATGA TGGACCAAAT CATTAGCGCG 
ATGGCAGAGC CTGATCATGC CTTATTGATT GATTGTTTAG AATTAGAAAG CGAATCGGTG 
CTATTACCAG AAGAACTTAG CTTAATCGTA ATCGACTTAA AGCAAGACCG TCATGGTTTT 
ACCCAACAAT TTGAACAACG TAAGCAAGAG TGTAATCAGA TAACCAAGTT ACTTGGCCTC 
GATTCTTTGC GTGATTTATC ATTGAGCCTA CTCACGGCAG ATAAAGAATC ACTCAGTGAT 
GTTCAGTTTC GTCGAGCACG CCATGTCATT ACCGAAAATC AACGTACTAG TAATGCTGCC 
AGAGCTTTGC AACAAAACAA TATTGCCCGT TTTAGTCAGT TAATGGCACA GTCTCAAGCA 
TCAATGCGCG ATGACTTTGA CATTATCACT GCCGACATTG ACACCTTAGT GAGCATGATT 
GCGAATTTAA TCGGTGAAAA GGGCGGCGTA CGTATGAGCG ATGGCTGCGT ATTGGCATTG 
GTCAATCATG ACCTTACCGA TGAGGTGATT AACCTAGTTG AAAACCAATA TTTTAAGCAA 
ACAGGTATCG AAGCAACAAT ATACTTATGT TCAGCGAGTG GCGGTGCAGG ACGCATCGGC 
TAA
 
Protein sequence
MSNPAQRATK LFVRTFGTKP DDLYQAPGRV NIMGEHTDYN EGLALPAAIN FHTVIAVKHR 
DDNLFRAVTT AFPGEIKQWH FGEEGPVAAG DDWSHYLKSV TAAMNQSGLR AKGLDLAIVG 
DVPLGAGLSS SAALEIAFGT AISYASQLNL SPIAIAQLAQ RGESQFMLLD CGMMDQIISA 
MAEPDHALLI DCLELESESV LLPEELSLIV IDLKQDRHGF TQQFEQRKQE CNQITKLLGL 
DSLRDLSLSL LTADKESLSD VQFRRARHVI TENQRTSNAA RALQQNNIAR FSQLMAQSQA 
SMRDDFDIIT ADIDTLVSMI ANLIGEKGGV RMSDGCVLAL VNHDLTDEVI NLVENQYFKQ 
TGIEATIYLC SASGGAGRIG