| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3650 |
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| Symbol | |
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| ID | 4280543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4329749 |
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| End bp | 4330519 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638136463 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_752316 |
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| Protein GI | 114564802 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAA ATACTATATT TATTACCGGC GCAGCTTCCG GCATTGGCTT AGCGACTGCA
AAACACTTTC ACAAAAAGGG CTATTGGGTC GGTATGGCCG ACATCAATTT AGCGCAATTA
ACACAGGCCA CCGAAATATG GGACAGAACT CGAGTACGGT TGTTTCAGCT AGATGTCAGT
GATTTTTCAC AAGTACAACA CGCCATGGCT AAATTTTGTG CGGAACATAA TAACTGCTTG
GCTATATTAG TTAATAATGC CGGCATATTG GAAATAGGCC CCTTTGAAGA CATCCCTATC
GAACATCATC AGCGCACATT AAGTGTCAAT GTCATCGGGG TCATGAATCT GTGTCATGCT
GCATGGCCAT ATTTAAAAAA TTCCGGCACA AGTACTATTA TCAACATGTC ATCAGCCAGT
AGCGATTATG GTGTACCAGA ATTAGCCAGC TATTCGGCCA GTAAGTTTGC CGTAAAAGCA
CTGACCGAGG CGCTGGAACT TGAGTGGAAA AAGTACGGCA TCAGCGTATG CGATGTCATG
CCGCCCTTTG TGGCAACCAA TATGCTTAAG GCGCAGAAAA ACAGCGCCAA AGTCATGCAA
CGACTCGGCG TGAATATCAC TGCTGAACAC GTAGTCGCTG TGATTGATAA ACAAGTGAAA
CAGCCTAAAA CCCATAGAAC AGTCAGTGTT TTTTATGGCT TATTGCATAG ATTAAATAAC
GTATCACCGG CATTTATCAA TCGCCTAGCG ATGAAGTGGC TAAGTCGATA A
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| Protein sequence | MNKNTIFITG AASGIGLATA KHFHKKGYWV GMADINLAQL TQATEIWDRT RVRLFQLDVS
DFSQVQHAMA KFCAEHNNCL AILVNNAGIL EIGPFEDIPI EHHQRTLSVN VIGVMNLCHA
AWPYLKNSGT STIINMSSAS SDYGVPELAS YSASKFAVKA LTEALELEWK KYGISVCDVM
PPFVATNMLK AQKNSAKVMQ RLGVNITAEH VVAVIDKQVK QPKTHRTVSV FYGLLHRLNN
VSPAFINRLA MKWLSR
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