| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3600 |
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| Symbol | |
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| ID | 4280493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4273718 |
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| End bp | 4274485 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638136412 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_752266 |
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| Protein GI | 114564752 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000312486 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAATT CAACTCAAAC AACAGCGCTG ATTATTGGCG GTACAAGTGG TATCGGTTTT
GAAACGGCCA AACAACTCGT GCTTCAGGGT GTTGATACCA TTATTGTTGG CAATAAAGCC
GACAAACTCA ATGCTGCAGT GGCGCAACTG TCTCCACTTG GAAATGTCAG TGGCTTTCAA
GCCAATTTAT ACGATTCGCA AGATCTCAGC CGTTTGATCA ATATGATCAA CACCATCGAT
CATAAAATTG ATCATTTAGT TAATGCTGCC GGTTATTTTA ATCCTAAGCC GTTTTTAGAT
CACCAAGTGA GCGATTACGA TATCTACATG GAGCTTAACA AAGCCATTTT TGTGATTTCA
CAGGCAGTAG CCAGAAACAT GATTAAACAT CATGGCGGTA GCATAGTGAA CATTGGTTCT
ATGTGGGCTA AACAAGCGAT TAAAGCCACA CCATCAAGCG CATATTCTAT GGCTAAAGCG
GGTTTACATG CATTAACTCA ACACATGGCA ATGGAGCTGG CGGAGCATCA CATTCGCGTT
AATGCAGTAT CACCAGCCGT TGTGAGTACG CCAATTTATC AAGCCTTTAT TGAACCGCAA
GATATGGCCG CTGTGCTTGA TAGTTTTAAT TCATTCCATC CAATTGGTCG AGTAGGTAGT
CCGGCCGATG TAGCAAACAG CATAGTATTT TTGTTATCAG AGCAAGCCGC TTGGGTGACG
GGCTCGATAT GGGATGTAGA TGGCGGCGTG ATGGCTGGTC GTAACTAA
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| Protein sequence | MTNSTQTTAL IIGGTSGIGF ETAKQLVLQG VDTIIVGNKA DKLNAAVAQL SPLGNVSGFQ
ANLYDSQDLS RLINMINTID HKIDHLVNAA GYFNPKPFLD HQVSDYDIYM ELNKAIFVIS
QAVARNMIKH HGGSIVNIGS MWAKQAIKAT PSSAYSMAKA GLHALTQHMA MELAEHHIRV
NAVSPAVVST PIYQAFIEPQ DMAAVLDSFN SFHPIGRVGS PADVANSIVF LLSEQAAWVT
GSIWDVDGGV MAGRN
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