Gene Sfri_3553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3553 
Symbol 
ID4280446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp4222098 
End bp4222838 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content43% 
IMG OID638136365 
Producthypothetical protein 
Protein accessionYP_752219 
Protein GI114564705 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.767129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGTCAT TTATCGATCC AACGACCTTG ATACTGGCAT CAATTATCGT GTTTTTTGGC 
GCGCTAACTC AAAGCTTAAT TGGCTTTGGG TTAGCCGTTG TTGCAAGCCC GCTGCTGTAT 
ATTGTTAATC CTCAATTAGT TCCAGTTCCG ATAATTGTTA TGGGCTTTGC CATTTCTGCA 
ATGACCTTGT TTAGAGAGCG TGGTCACTTA CAATTTAATG GTTTGCAATA TGCCTTACTC 
GGGCGAATTC CTGGGGGGTT TTTAGGCGCT GGATTATTGC TGTTTGCCCC ACAAGCAATA 
TTAGGCTTAG TGATTGCAGC TATTGTGTTT ATTGCTGTTA TTCTTAGTAT CTTTCGCTTT 
AGCGCCCCCA TCAATCGCCT CAGTTTATTT ATCGCAGGGG TATTTTCGGG CATATTTGGC 
AATATCGCTG CCATCGGCGG TCCGCCAATG GCCATTTTGC TTGCAGGCCA AGACCCAAGT 
CAATTTAGAG CCGCTTTATC AGCCTTCTTC GTGTTTAGCT CATTAATAGC GCTAGCCATT 
TTAGCCATCG TAGGCTTAGT TGAAGTGAAG CATTTATGGC TATCACTGCT ATTATTGCCT 
TCAGTCGTTG CTGGTTATCT TGTCTCGGGT AAGTTAATTG GTCGCGTTGA TAAAGATAAA 
ACCCGTATAG CCACATTAGT GTTATGTAGT ATTAGTGCAA CCGTGTTAGT TATTATGTCG 
ACCAACACGT TAATGAGCTA A
 
Protein sequence
MMSFIDPTTL ILASIIVFFG ALTQSLIGFG LAVVASPLLY IVNPQLVPVP IIVMGFAISA 
MTLFRERGHL QFNGLQYALL GRIPGGFLGA GLLLFAPQAI LGLVIAAIVF IAVILSIFRF 
SAPINRLSLF IAGVFSGIFG NIAAIGGPPM AILLAGQDPS QFRAALSAFF VFSSLIALAI 
LAIVGLVEVK HLWLSLLLLP SVVAGYLVSG KLIGRVDKDK TRIATLVLCS ISATVLVIMS 
TNTLMS