Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3469 |
Symbol | |
ID | 4280366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 4126523 |
End bp | 4129174 |
Gene Length | 2652 bp |
Protein Length | 883 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638136285 |
Product | transposase Tn3 family protein |
Protein accession | YP_752139 |
Protein GI | 114564625 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4644] Transposase and inactivated derivatives, TnpA family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCATCA AAAACGAAAT TTCTATTCTC ACGAGAGCAG AACAGGCAGA TCTTTATTCC CCACCCATTT TTTCAATCGA AGAACAACGT CTGTATTTTT CTCTGAACGA TGGGGAATTG GCAGTTTTTC GGTCAATTCG TCTCAGAGCT CATAGATGTT ACTTTGTCGC GATTTTGGGA TACTTTAAAT CAAAGCCCGT CATCCTAGAT ATCGCTTACT CGCAGGTTTC TAAGGATTTA ATGTTCATCA GTAAAGAGCT GCTTGGCGGC AAGGGGCTCA GACCATTCAC TCCCTCACAA AAACAAAAAG ATCGACTCTA CGCAAAAGTA TTAGACCTTG CTGGTTATCA CAAATGGGAC GAAAGTCAGC ACTTCAATTC TCTTTTCGAC CACCTTGTTC AGGTGGGCAA TGCCTGGCTG GAGCCGCGTT ACCTCTTTGA TACTGCTATT GAATTCCTAG CCAGTCACAG CATTGCTATC CCCAGGTATA CCGTACTCCA GAGACTGATA AGCAGAACAA TGCAGCAGGT CAGAAAAGAC CTGGCGCACC AACTTAATCA ACTCACCAGT CCTGAACTTC ACGTCTTTCT GGACAGCATA ACAGCCATTG ATGACGGACT AAGCCTGAAC CAGCTCAGAG GCGGTGCAAA AAGTCTGACC GTACCTGAGC TTAAAAAAGA GCTTGCCCTT TATCATCAGT TAGCGCCATG GCGCACGCAA ATCAATGGCG TTATCGATGG GCTTAATCTG TCTCTTAAAA ATCGACAACA CTTCGGTGAG CTCATCAACT ATTACGGCAG TAAACTCAAA CGATTCAAAC GCGCACAGCA GCATCTATGG TTGCTATGTC ACCTGACAGA GCGGATACAA CTGGCACTGG AACGGTTAAC TGATGGGTTC ATTTACCATA TCCGCAAGCA ACAAGAAGCT GCCAACACCT TTGCACAACA AGCAGTGTTC CTGTCCTGGC AGTCAGCCGC GGACAATGTC ACAAAAGCGG CAGAGTTACT GCATCTGTTT GTGGATGAGA ACATTGATGA TAATCAACCC TTCTCAGTAG TCAGACAACA GGCATTGAAG GTCATGAATG ACAGGGATAT CCAGACCCTC TGCCTTTACC TGAAAAAACA GAAACGGACC GTGGAAGAGT ACCAGTGGCA ACATTACGAT GAACAATGCA ATCTCCTGAA GCAACTGTTA AGGCAGGTGT TCTTGTGCCT TGATTGTGAG GCCGGTAAAG GCTCAGAAGC CGTCGTCGCC CAACTTCAAC AGATTCAGAC GGAAATCGCA TCCGGTGGAC CACTGAAGAC GATGGATACG TCGCTCATCC CGAAAAAGCA CCTCCCATGG TTGGTTAAAC AGGATAACGT TAACCCGCAA CGTTACGAAT GGCTGCTCTA CCGCCAGTTG ACTTCGCGAC TGAACGGACG CATTTATTTG CCAAATGTTA CCAAATACCG CGCACTGGAA GACGACCTGA TCCCCCAGAC ATCGCAGGAT ACCTTGCTGG CCTCATCAAC ACTGGACAGA CTAAAACAGC CCGCAGAGTT ATTGTTACAG GAGCAACAAC ACCGGCTGGA AAGTGCGCTC AAAGACGTTG CTCTCCATAT TGATGAGGGA GACAATCGAA ATGTGATCAT GAAAAATCGT ACCGGTACCC GCTGGCGTCT GCCGACCAAA AGCGCTACAT CTCTGGTCAA CAATCCCTTT TTTAAGCGAA TGCAACCGGT CGATATCGCG GATGTACTGC GGTATGTAGA GCGCGAAACC GGGTTCATGA AATGTCTGAC TCATGTACTT CCGATACAAA AACAAGGGTT CACTCATCAG GATGATTTAC TGGCCATTCT GATTGCCAAC GCCACTCACC GTGGTGTGTA TGGCATGGCG CAGATCTCCG ATCGAAGCTA TGAACACCTG AGTACGGTGC AGGCCAACTA TATCCGGCCT GAAACGCTGC ATGATGCCAG CGATGTGATC AATAATGCGG TTGCAGCGCT ACCCATCTTC CGCCACTACC ATATTCAGGA GGACCAGTTG CATGCCAGTG CGGATGGTCA GAAATTCGAA ACCCATCTGG AAACCTTTAA AACCCGGTAC TCCTCTAAGT ATTTCGGCAC CAATAAAGGG ATCACGGCCA TGACACTGGT AGCCAACCAC AGCGCCCTCA ATGCTCGGAT CATCGGTTCC AACGAGCACG AATCACACTA TATTTATGAC CTGTTACAAT CCAACAGCAG TGATATCAAA CCTGACGTAC TCTCGACAGA TACACACGGT GTCAATCATG TTAACTTCGC CTTACTGGAT CTATGCGGTT ACAGTTTTGC ACCGCGATAC GCGCAGTTCA GTAGTGTCAT CAACGATCTG TTTGACGTAA CTGAAAATGA ACATGGCGGC ACCAACCTTG CCCTGAAAAA GCCCATCAGG ACGAATGTCA TCGAAACGGG ATGGCAGGAT ATTAGGCGCA TTGTTCTGTC ACTTCAGACA AAGGCTAAAT TTGCCCAACG CGCCAAAAAT GTAAAGTTAG CTTTAAGCTC TAAAATTCAT CACTTGAATT TTCGTTCTCA ATCAGCGCTT GCTTCCAATA TTCTGGTTCA GCATATCGAG CAACCAATGC ATCGATATCT ATTTTTGAGG TTGATGGACT AA
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Protein sequence | MAIKNEISIL TRAEQADLYS PPIFSIEEQR LYFSLNDGEL AVFRSIRLRA HRCYFVAILG YFKSKPVILD IAYSQVSKDL MFISKELLGG KGLRPFTPSQ KQKDRLYAKV LDLAGYHKWD ESQHFNSLFD HLVQVGNAWL EPRYLFDTAI EFLASHSIAI PRYTVLQRLI SRTMQQVRKD LAHQLNQLTS PELHVFLDSI TAIDDGLSLN QLRGGAKSLT VPELKKELAL YHQLAPWRTQ INGVIDGLNL SLKNRQHFGE LINYYGSKLK RFKRAQQHLW LLCHLTERIQ LALERLTDGF IYHIRKQQEA ANTFAQQAVF LSWQSAADNV TKAAELLHLF VDENIDDNQP FSVVRQQALK VMNDRDIQTL CLYLKKQKRT VEEYQWQHYD EQCNLLKQLL RQVFLCLDCE AGKGSEAVVA QLQQIQTEIA SGGPLKTMDT SLIPKKHLPW LVKQDNVNPQ RYEWLLYRQL TSRLNGRIYL PNVTKYRALE DDLIPQTSQD TLLASSTLDR LKQPAELLLQ EQQHRLESAL KDVALHIDEG DNRNVIMKNR TGTRWRLPTK SATSLVNNPF FKRMQPVDIA DVLRYVERET GFMKCLTHVL PIQKQGFTHQ DDLLAILIAN ATHRGVYGMA QISDRSYEHL STVQANYIRP ETLHDASDVI NNAVAALPIF RHYHIQEDQL HASADGQKFE THLETFKTRY SSKYFGTNKG ITAMTLVANH SALNARIIGS NEHESHYIYD LLQSNSSDIK PDVLSTDTHG VNHVNFALLD LCGYSFAPRY AQFSSVINDL FDVTENEHGG TNLALKKPIR TNVIETGWQD IRRIVLSLQT KAKFAQRAKN VKLALSSKIH HLNFRSQSAL ASNILVQHIE QPMHRYLFLR LMD
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