Gene Sfri_3329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3329 
Symbol 
ID4280231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp3978973 
End bp3979812 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content44% 
IMG OID638136150 
Productcalcineurin phosphoesterase C-terminal domain-containing protein 
Protein accessionYP_752004 
Protein GI114564490 
COG category[R] General function prediction only 
COG ID[COG1409] Predicted phosphohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.217792 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTTAAAG ACGCAGTGCA TTATTCTGTT GCTGAAAATG AGCCTGTGCG ATTAGTACAA 
GTGACGGATC CGCATCTTTT TGCTGATCCC GAAGGTCAAT TGCTTGGTGT TAATACGGCA
CAAAGTCTTC AAGCCGTATT GAATACGTTC ATTGCAACTC AATATCCCGC CAATATTTTA
TTGGCAACGG GAGATATTAG CCAAGATTAT TCACCTGAGT CTTATCAGCA CTTTGTGCAG
AAGATTGAGA TGTTAGATCT GCCTTGTCAT TATTTACCCG GAAACCACGA TGACCCCCGC
TTAATGAGCC TGCGTATGCA AGGTGAAAAA GTGTTTGGTC AACAACGGAT AATTATTGGT
AACTGGCTGA TATTAATGCT CGACTCAACC GTTCGTGGTA AGCCCGGTGG CTATATGGGC
GAGCAGCAGT TTGCCTTGAT TGAAGCTGCA ATTAAGGCGA CACCAGATAA ACATGTGTTA
TTAGTGATGC ACCATAATCC TATTTTAATG CAGTGTGCTT GGTTAGATCA GCATTGCATG
ATGAATGGTG AAGACTTTTT GCAACGAACA AGTCGCTACC CGCAAGTGAA AGGCGTTCTT
TGGGGGCATG TACACCAACA AGTAGATAAT ATCCATCGTG GACCGCATGG TCCTATTCCA
TTAATGGCGA CACCCTCGAC GTGTATTCAG TTTAAACCAT TATCATCCTA TTTTGCCTTA
GATCATCGTC AACCGGGTTA TCGTTTGCTG GAGTTGGCAG GCGATGGTAG CATTCGTACT
AATGTGTATC GCGTGCCTGG AAATCGATTT GCACCAGATA ATGAGGCCAG CGGATACTAG
 
Protein sequence
MLKDAVHYSV AENEPVRLVQ VTDPHLFADP EGQLLGVNTA QSLQAVLNTF IATQYPANIL 
LATGDISQDY SPESYQHFVQ KIEMLDLPCH YLPGNHDDPR LMSLRMQGEK VFGQQRIIIG
NWLILMLDST VRGKPGGYMG EQQFALIEAA IKATPDKHVL LVMHHNPILM QCAWLDQHCM
MNGEDFLQRT SRYPQVKGVL WGHVHQQVDN IHRGPHGPIP LMATPSTCIQ FKPLSSYFAL
DHRQPGYRLL ELAGDGSIRT NVYRVPGNRF APDNEASGY