| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3222 |
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| Symbol | |
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| ID | 4280124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3859382 |
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| End bp | 3860971 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638136040 |
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| Product | PepSY-associated TM helix domain-containing protein |
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| Protein accession | YP_751897 |
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| Protein GI | 114564383 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.43081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGTTC GCGGAGATAT TCTACGTACA TATCAATCCA TCCATACATG GACAGGTATT
ATTGCCGGTT TAGTACTCTT TATTGGTTTT TATGCTGGTT CATTGACGAT GTTTAAGGAA
GAAATTACTC AATGGGCGAC ACCGCCAAGC CATCAATTAC CACAAGTACC AAAAGATCAG
TTTGATCAAT TAATCTTACA AGCATCAACA AATTTTGATA AAGCCCAGCA AAGTTTTACG
GTTAACTTTA ATCAACAATT ATCGCCGCTT ACATGGTTTG AACAGGGCGG TGGCCGTGGT
TTACATTTAA ATAATGTCAT GAGACACGCG ACCTTGTCAG ATGAAGGGGC GTTAGTTACC
CAAGTTAACC CCACGAATGA ACTCGGAGAG TTGATTGATA TGCTTCATCG CACGGCTGGC
ATAGCAGGAA AAGCCGGGCA TGAAGATATT GGTGTTCTCG TTTTAGGGGG GGCATCAGTG
CTATATTTTT TAGCATTAGT GTCTGGTGTT ATTTTTTTAT TACCGACGTT AGTTAATAGC
TTTTTAGCGA TAAGAAAGAA CAAAGGCGTA AATCGTTTTT GGCTCGATAG CCATAATTTA
GTCGGTATTA TTAGCTTACC GTTCCATTTG ATTATTGCTT GGACTGTGAT TGTGTTTGCT
TTTCATGATG TTCTTTATGG TGGTTTAAGC CTAGTATATG GCGATGAACC CATGTTCGAT
CGTGGTGAGA GATCAACAAT AGAGTACTCA ATTGAACAGC TTCCGCCTAT TTCAAGCTAT
CTTCAGAAAG TTAATGAAAT GACCGACGGT TACCATGTGG AATCAATGGC TTTCTCTGAT
TTATCAACAA CAAATCCAAT GGTTGGCATT ACCATTATTA ACGAACGTGA AATGATGCGT
GTCAATTCTG GCGATTTTAT TTACATGAAC CCTTATACCT TTGATGTTGG CTACAGTAGT
ATTCCGTTGA AAGATAATGA TATTTATACT CCACTGGTTG CTAGCTTTTT TTCGCTACAT
TTTGGCGGCT ATGCTGGAGA TTTAGGTCGG TGGGTTTATT TTTCTTTGGG CTTACTTGGG
GCATTTTTAT TCTATAGTGG TAATTTATTA TGGTTAGAAA AGCGTCGACA AAAACAACCA
TTACAAAATA AATCCAGCCG TTTTATGGCA TCTTTGACCG TGGGTATGTG TTTAGGCTCA
ATATTAGCCG TAATGATAAC GATGCTTTCA AGTAAATGGT TGTATCTCAT TAGTGATCAG
GTTAATAACA ATTACCTTAT TTGTTATTAC GTAGTATTTT TTAGCGCATT AATTTATAGT
TTTGTTGTTG GTGCAGCTAA AAGTGCTATT TACTTACAAT ACCTATTATT TGTGGCCTGT
TTATTAATAC CAATCACTTC TGTTGTGTCT TTTATTATGC CGAGCATAGG GTTGTGGGGA
CCCATTTACT TTCCCAGCAT GGTCGTTGAG TTTATTGCGT TAGTTTTTGC GGGTGTATTT
TATTATGGTG CGATTAAAAC TAAACAGCGT GTTTATTATG GTGAACGTAA TAGCATATGG
GCTTTACCGT TAACAACCGC TACTGAGTAA
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| Protein sequence | MRVRGDILRT YQSIHTWTGI IAGLVLFIGF YAGSLTMFKE EITQWATPPS HQLPQVPKDQ
FDQLILQAST NFDKAQQSFT VNFNQQLSPL TWFEQGGGRG LHLNNVMRHA TLSDEGALVT
QVNPTNELGE LIDMLHRTAG IAGKAGHEDI GVLVLGGASV LYFLALVSGV IFLLPTLVNS
FLAIRKNKGV NRFWLDSHNL VGIISLPFHL IIAWTVIVFA FHDVLYGGLS LVYGDEPMFD
RGERSTIEYS IEQLPPISSY LQKVNEMTDG YHVESMAFSD LSTTNPMVGI TIINEREMMR
VNSGDFIYMN PYTFDVGYSS IPLKDNDIYT PLVASFFSLH FGGYAGDLGR WVYFSLGLLG
AFLFYSGNLL WLEKRRQKQP LQNKSSRFMA SLTVGMCLGS ILAVMITMLS SKWLYLISDQ
VNNNYLICYY VVFFSALIYS FVVGAAKSAI YLQYLLFVAC LLIPITSVVS FIMPSIGLWG
PIYFPSMVVE FIALVFAGVF YYGAIKTKQR VYYGERNSIW ALPLTTATE
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