| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3209 |
|---|
| Symbol | |
|---|
| ID | 4280111 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | - |
|---|
| Start bp | 3841813 |
|---|
| End bp | 3842580 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638136027 |
|---|
| Product | Na(+)-translocating NADH-quinone reductase subunit C |
|---|
| Protein accession | YP_751884 |
|---|
| Protein GI | 114564370 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2869] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC |
|---|
| TIGRFAM ID | [TIGR01938] NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0626162 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTTTA AGAAAGATTC AGTCGCTGGA ACAATGGTTT TTATCATCAT TTTAAGTCTA
GTTTGCTCAT TTATGATCAC CGGTACCGTG GAGATTTTAA AAGAACGTAA GCTGGCTAAA
AAGCGCGAAG AAGTGCAGCA GTTTGTGTTA AAAGCTGCGG ACATCGACAT CAGTCAAGGT
GACTTTAGCG AGTTATTTGC CCAACGAGTA AAGCCTAAGA TGGTTAACTT AGCGACAGGC
AAGGTAACTG AAAAAGCCAA TTTACTTGAT TTTGATGAGC GCATGGCATC GATTAACCCA
GAAACATCTT CTAAACCGAA AAAAGACACC GCCAAAATTA AAACCATGGC GAACGACATT
CGTATTTTTG AGGTGTATGA CACCAATGGC CAACTTGCCA GCATTGTTAT GCCGATTTAT
GGCAAAGGTT TGTGGTCGAT TATTTACGGT TACATGGCGA TAAAACCAGA CTTAAACACT
ATTGAAAACA TCGTGTTTTA TGAGCATGGC GAAACCCCTG GTATTGCTGA CTTTGTTACC
GACCCACAAT GGTTAGCACT ATGGAAAGGC AAAAAGCTAT TTAATGAAAA AGGCAAAATT
GCCATTAAGG TTATTAAAGG CGGCGCTAAA GACGGCGACA TTCACGGCAT CGATGGTGTT
AGTGGTGCGA CGCGCACGGG CGTAGGTATT CAACGCTTAG TCGAGTTTTG GTTTGGCGTC
GAAGGGTATC AAACCTATCT ACACACGTTA GCTGCGGAGG GTAAGTAA
|
|---|
| Protein sequence | MAFKKDSVAG TMVFIIILSL VCSFMITGTV EILKERKLAK KREEVQQFVL KAADIDISQG
DFSELFAQRV KPKMVNLATG KVTEKANLLD FDERMASINP ETSSKPKKDT AKIKTMANDI
RIFEVYDTNG QLASIVMPIY GKGLWSIIYG YMAIKPDLNT IENIVFYEHG ETPGIADFVT
DPQWLALWKG KKLFNEKGKI AIKVIKGGAK DGDIHGIDGV SGATRTGVGI QRLVEFWFGV
EGYQTYLHTL AAEGK
|
|---|
| |