Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3177 |
Symbol | |
ID | 4280079 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 3804634 |
End bp | 3805206 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638135995 |
Product | NTPase |
Protein accession | YP_751852 |
Protein GI | 114564338 |
COG category | [S] Function unknown |
COG ID | [COG1986] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00258] inosine/xanthosine triphosphatase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCAACTT TTACTGCGAT ACCACAAACG TTAACTATCA TTGTTGGTTC AACCAACCCA GTTAAAATCA ATGCTGCAAA ACAGGCTATT GGACAATATT TCCCTGATGT TCATATTGAT TGTACTGGCA TGCATGCACC ATCACTGGTG GCAGACCAAC CCATGACCGA AGCAGAAACT AAATTGGGTG CCATCAACCG AGCTCAATTT TGCCAAGCCA ATGCAAAAGT AGTCGATCAA CATGCTGACT TTTATGTGGC AATGGAAGGC GGAGTCGATC AGTTTGATCA CAGCCCAGCC ACCTTTGCTT ACATGGCCAT TATCCATAAC GGCACATTAT CTGTAGGTCG TAGCGCTAAC TTGCCGTTGC CACAGTCAAT TTTTAACGCT TTACAAGCAG GTGAAGAACT TGGCAAAGTA ATGGACCGAG TATTTAACAC TCATAATATT AAACAAAAAG GTGGCGCGAT TGGCTTGCTC ACTCGAGGTT TAGCCACCCG CGAAAGCATT TATACCCAAG CATTAGTGCT GGCAATGGCT CCTTTTATCA ATGCGGAATT ATTTAATGAC TGA
|
Protein sequence | MPTFTAIPQT LTIIVGSTNP VKINAAKQAI GQYFPDVHID CTGMHAPSLV ADQPMTEAET KLGAINRAQF CQANAKVVDQ HADFYVAMEG GVDQFDHSPA TFAYMAIIHN GTLSVGRSAN LPLPQSIFNA LQAGEELGKV MDRVFNTHNI KQKGGAIGLL TRGLATRESI YTQALVLAMA PFINAELFND
|
| |