Gene Sfri_2877 details

Gene Information

• Locus tag: Sfri_2877
• ID: 4279782
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: -
• Start bp: 3460049
• End bp: 3460750
• Gene Length: 702 bp
• Protein Length: 233 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 638135697
• Product: SapC family protein
• Protein accession: YP_751555
• Protein GI: 114564041

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.193841
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCAACC AGATTACATT ATTAGAACAA ACCAAGCATG GTGATTTAAA ACTGACTCCA 
AGTGACTTTT CACACGTGGC GGAGCAGCAC ATCGTGCCGG TTACTTTGCA TGAAATTAAT 
CGTGCTGCCA CTGAGTATCC AATCGTATTT GTTAAAAACA GTGATACCAA CGAATTTCAA 
TCAGTTGCAA TGTTAGGCCT AAAACCTGGT CAGAATCTAA GTGTAAAAGA CGGTAAGTGG 
CAAGGTTTGT ATATACCCGC AGTTGTTCGT GACTATCCTC TTGGTTTAGT GGTTAACCCA 
GACGTTAAAG ATAAAGTCTG GATTGGTATT CGCGAAGATG CCAAAGAAGT GACTAAAACA 
GACGGCCAAG CATTGTTTGA AGATGGTAAA GAAACCCCGT TTTTAGAAGC GCGTAAGCAA 
GCGTTGATTA GCCATTATGA ACAAGATCAA GCTACTCGCG GTATTTTAGG TTTTTTAGAT 
GAAAAAGGGC TGCTGATTAA TCAGACTCTT ACTGTTGATG TCGCCGGAGA GAAACGCAAT 
ATCAATGGTT TATACCTTAT TGATGAAGCT AAATTAAATG CATTAAGCGA CGAAGAGTTT 
ATCGAACTTA AAAAGCGCGG TTTACTAGGG CCGATTTATG GTCACTTGGG GTCATTAAAC 
CAAGTTAATC GTTTAGCTCG GGTTGAAGTA CTCGGTAGAT AG 

 

Protein sequence

MPNQITLLEQ TKHGDLKLTP SDFSHVAEQH IVPVTLHEIN RAATEYPIVF VKNSDTNEFQ 
SVAMLGLKPG QNLSVKDGKW QGLYIPAVVR DYPLGLVVNP DVKDKVWIGI REDAKEVTKT 
DGQALFEDGK ETPFLEARKQ ALISHYEQDQ ATRGILGFLD EKGLLINQTL TVDVAGEKRN 
INGLYLIDEA KLNALSDEEF IELKKRGLLG PIYGHLGSLN QVNRLARVEV LGR