| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2853 |
|---|
| Symbol | |
|---|
| ID | 4279758 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | - |
|---|
| Start bp | 3437992 |
|---|
| End bp | 3438525 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 638135671 |
|---|
| Product | glutathione peroxidase |
|---|
| Protein accession | YP_751531 |
|---|
| Protein GI | 114564017 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0386] Glutathione peroxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.154923 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAAAT ACATAACGGC AATTGGCTTA ATGGCATTAA GTTTTAGTAC TGTTGCTGCA
AATTGTCCTG ATTATCTCAA TGTTGAAGCT CGTAAATTAC ACTCAACAGA AAACGTAAAT
TTATGCGAAC TCACCCAAGG CAAAGCAGTA TTAATCGTTA ATACCGCATC GCACTGTGGT
TTTACGCCTC AATTCGAAGC TCTTGAAGCA TTACACAAAC AATATGCCGA TAAAGGTTTA
GTGGTGATTG GCTTTCCGTC AGATGATTTT TTCCAAGAAG AAAAAGACGA AGCAAAAACT
GCCGATGTTT GTTTTATTAA TTATGGTGTT ACATTTACTA TGGTGGCAAC ATCACCTGTT
AGAGGCGATG AAGCTAACTC CGTATTTAAA TACTTGGACG ATAAAAGTGC CGCACCTAAA
TGGAATTTCT ATAAGTATGT TGTTTCGCCT GACGGTCAAA CCGTGCAGCA ATTTAGTTCG
CGTGTGAAAC CCGATAGCGA AGAATTGAAA AATGCGATTG AATCAGTTTT GTAA
|
|---|
| Protein sequence | MIKYITAIGL MALSFSTVAA NCPDYLNVEA RKLHSTENVN LCELTQGKAV LIVNTASHCG
FTPQFEALEA LHKQYADKGL VVIGFPSDDF FQEEKDEAKT ADVCFINYGV TFTMVATSPV
RGDEANSVFK YLDDKSAAPK WNFYKYVVSP DGQTVQQFSS RVKPDSEELK NAIESVL
|
|---|
| |