| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2756 |
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| Symbol | |
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| ID | 4279662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3313102 |
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| End bp | 3314235 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638135575 |
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| Product | patatin |
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| Protein accession | YP_751435 |
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| Protein GI | 114563921 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCAGTAT CAACAGCATT AGTACTAGGA GGTGGTGGGG CCAGGGCTGC ATATCAAATT
GGCGTATTAA AAGCGCTAGT GCAGTTTTAC CCGCGCAATC ATAATGTCCC ATTTGATATT
ATTTGTGGTA CATCTGCTGG TGCCATTAAT GCAATATCGA TAGCAACCCA TGCATCTTGC
TTCCATTTAG CCATAAAAAA ACTGGATTGG GTGTGGCGTC ATTTTGAAAC CCATAAAGTC
TATCGCACGT CTATCCCTCA AGTGTTGAGA CATTTGGGAC GAATGGCTAT CAAAGGTCTT
CAAGATGACA AAGTCAATAC TGATGCAGGT AGCCTGCTGG ATAATCAACC CTTACGAGAG
TTGCTGAATA ATCTTATCGA TTTTAAAAGA ATTGATCGTA ATATTGGTAA TGATGCACTC
AAAGCTATCA GTATCGACTC CTCATGCTAC AACAATTCAC GTTCATATAC TTTCTATCAA
GGTAACGAAC ACATTGATGA TTGGCAACGT GCTAGACGAG TCGGTATTCG CAGTTTATTA
AATACTGAGC ACTTACTTGC AAGCTCAGCT ATTCCGATGG TATTCCCATC AATTAAACTT
AATCAAGCCT ATTATGGTGA TGGGTCTGTC CATCAATTAT CACCACTATC AAGCCCAATC
CACCTTGGCG CTAATAAAAT ATTTGTGATT AATTTAGACA GCCCACACAA ACACTTTCCC
ATCGAGTTTG AATATCACCC TAAAACAGCA ACAATCGCCG GACATTTATT AGATACCATT
TTTTCGGATA CATTGAACAG CGATTTAGAG CGTCTGCAAC GGGTCAACAA CACCTTATCA
ATGATATCCC CACAAGACCG TGAAACCTTG AACTTACGCC ATATCGATAC TTTAGTGATG
AAACCAAGTC AAGATTTAAG CCGAATTGCG GAACGGTTTT ATGATGACAT GCCTTTTGCA
ATCAAAACTT TATTGAAATT ATTTGGTATT AACAGACAGT CTGACTCAAG TATTGTGTCG
TACTTATTAT TCGAAAAAAG CTATACCACC ACCTTGATTG ATTTAGGCTA TCAAGATGCA
ATGGATAGAA TTGATGAAAT AAAACAATTT TTCGATATAC AGACTAAAGT TTAA
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| Protein sequence | MPVSTALVLG GGGARAAYQI GVLKALVQFY PRNHNVPFDI ICGTSAGAIN AISIATHASC
FHLAIKKLDW VWRHFETHKV YRTSIPQVLR HLGRMAIKGL QDDKVNTDAG SLLDNQPLRE
LLNNLIDFKR IDRNIGNDAL KAISIDSSCY NNSRSYTFYQ GNEHIDDWQR ARRVGIRSLL
NTEHLLASSA IPMVFPSIKL NQAYYGDGSV HQLSPLSSPI HLGANKIFVI NLDSPHKHFP
IEFEYHPKTA TIAGHLLDTI FSDTLNSDLE RLQRVNNTLS MISPQDRETL NLRHIDTLVM
KPSQDLSRIA ERFYDDMPFA IKTLLKLFGI NRQSDSSIVS YLLFEKSYTT TLIDLGYQDA
MDRIDEIKQF FDIQTKV
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