| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2634 |
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| Symbol | |
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| ID | 4279541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3153201 |
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| End bp | 3154124 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135430 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_751313 |
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| Protein GI | 114563800 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCTAT CGATCCCTTT TGTTTACCAC GCCAGCTATT CACAGCTGGC GTTACCTAGC
ACCCATCGTT TTCCAACCAC TAAATATCAC AATTTATACC AGCACGCGCT CAAACAACAA
TTATTGTTTG AGCAATATCG CCATACGCCT ACACCGATAT CGAAAGATAC GCTCTATACA
GTGCATTGCC CGCAATATGT CGAACAATTT ATCAATGGTG CCTTAGACCA TAAAGCCCAA
AGACGTATTG GTTTTCCATG GAGTCAAGAG TTAGTTACCC GCACTTTACA CGCTGTAAAT
GGCACCCGTT TGTGCGCTGA ATTGGCGCTT GACCATGGAA TCGCGGTTCA CTTAACTGGT
GGTTATCATC ATGCGCACTA TGATTTTGGC AGTGGTTTTT GCATTTTTAA TGACTTGGTT
ATCGCAGCGA GATCAGCCAT TGACTCAGGA AGAGCAGACA AAGTACTTAT TTTTGATTGT
GATGTTCATC AAGGTGATGG AACAGCGACA CTCACCCAAG GCAACCCAGA CATCATTAGC
TGCTCTATCC ACTGTGCGCA AAATTTCCCA TCCCGAAAGC AACAATCTGA TCACGATATT
GCTCTGGATA AAGGTTGTAC CGACAAACAA TATCTTGAAC ATATACAACA AATATTACCT
TACCTGATTC GCATCCATCA GCCAGATCTG ATCATCTATG ACGCAGGGGT CGACATTCAT
CAACATGATG ACCTTGGATA TTTCAGCATT TCGAATCTAG GTATTCTCGC TAGAGATAAA
CAGGTAATAT CAATAGCAAA AATGCATGGC ATCCCACTTG CAGCAGTAAT AGGGGGAGGC
TATAGTCGTA GTGAAGCAGA ATTAACAATC CGACATAGCC AATTGTTAGT TGCGGCCAAT
GAATTATGGG CATCACAGTA TTAG
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| Protein sequence | MSLSIPFVYH ASYSQLALPS THRFPTTKYH NLYQHALKQQ LLFEQYRHTP TPISKDTLYT
VHCPQYVEQF INGALDHKAQ RRIGFPWSQE LVTRTLHAVN GTRLCAELAL DHGIAVHLTG
GYHHAHYDFG SGFCIFNDLV IAARSAIDSG RADKVLIFDC DVHQGDGTAT LTQGNPDIIS
CSIHCAQNFP SRKQQSDHDI ALDKGCTDKQ YLEHIQQILP YLIRIHQPDL IIYDAGVDIH
QHDDLGYFSI SNLGILARDK QVISIAKMHG IPLAAVIGGG YSRSEAELTI RHSQLLVAAN
ELWASQY
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