| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2570 |
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| Symbol | |
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| ID | 4279477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3074039 |
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| End bp | 3075049 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638135363 |
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| Product | putative periplasmic protease |
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| Protein accession | YP_751249 |
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| Protein GI | 228962557 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAATTTT TATATGAATA CGGCCTATTT TTAGCAAAAG CGGTAACCAT TGTTGTCGCT
ATTCTAGCGG TAGTAATATT TGTGCTGGCG GCTAGCATGA AAAATAAATC TGATAAAGGT
GAGCTAAGAC TGACTGATAT TTCAGATGAA CTTATGCAGT TAAAGCATCA GTTGAAAGAA
GAGTTACTGC CTAAAAAGCA ATTTAAAGCC TATGAAAAGC AAGTAAAAGC AGCCGAAAAA
GCTGCTGAGA AACAAAACTT AACCAAAGGC AAAGTATTCG TTATCGATTT TAAAGGCAGT
ATAGATGCCA ATGAAGTCTC GTCATTACGC CAAGAAGTGA CCGCAATTAT AACCATCGCA
GATAAAGACG ACCAAGTGTT GGTCAATGTT GAAAGTGGTG GCGGCATGGT TCATGGATAT
GGCCTCGCTT CAAGCCAGTT AGACCGTTTG CGTCAAGCCA ATATCCCGTT ATCTATTTGC
GTAGATAAAG TGGCTGCAAG TGGTGGTTAT ATGATGGCGT GTGTGGCTAA TAAGGTTTAC
GCCGCACCGT TTGCGATAGT GGGCTCAATT GGGGTGATTG CGCAAATCCC CAACTTTAAT
CGTCTGCTAA AAAATCATGA TATTGATTAT GAGCAGCACA CTGCTGGTGA CTTTAAACGT
ACCTTAACCG TTTTTGGTGA AAACACTGAT GAAGGCAGAG CTAAGTTTCA ACAGGAATTA
GAAGAAACTC ACGTGCTTTT TAAAGAGTTT GTCGGCCGTT ATCGTCCTAA TATGGACATT
GCTAAAGTCG CCACTGGTGA ACATTGGTAT GGCCAACAAG CAATTGATTT AGGGCTTATT
GATGCGGTTT CTACCAGCGA TGATGTAATT TTAGACTTGG TGAATACCCA TCAAGTGATT
AAAATTCAAT ATCAAATGAA GAAAAAGCTA GCGGATAAAA TTGCTCATGG CGTTTCACTA
TCAGTGACCA CTATGATGAA TCGTTTTGCG GAGCGTAATC AATCGGTGTA G
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| Protein sequence | MEFLYEYGLF LAKAVTIVVA ILAVVIFVLA ASMKNKSDKG ELRLTDISDE LMQLKHQLKE
ELLPKKQFKA YEKQVKAAEK AAEKQNLTKG KVFVIDFKGS IDANEVSSLR QEVTAIITIA
DKDDQVLVNV ESGGGMVHGY GLASSQLDRL RQANIPLSIC VDKVAASGGY MMACVANKVY
AAPFAIVGSI GVIAQIPNFN RLLKNHDIDY EQHTAGDFKR TLTVFGENTD EGRAKFQQEL
EETHVLFKEF VGRYRPNMDI AKVATGEHWY GQQAIDLGLI DAVSTSDDVI LDLVNTHQVI
KIQYQMKKKL ADKIAHGVSL SVTTMMNRFA ERNQSV
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