Gene Sfri_2526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2526 
Symbol 
ID4279435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp3019285 
End bp3019890 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content43% 
IMG OID638135321 
Productputative sulfite oxidase subunit YedZ 
Protein accessionYP_751207 
Protein GI114563694 
COG category[S] Function unknown 
COG ID[COG2717] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGATAA GCCCTCGAGG TCTGTTTTGG CTAAAGGTGT TGTTGCATAT CAGTTTTTTA 
TTGCCTGCCT TTTATCTCGT GGCGCTAGTG TTAACCGACA ATGCGGGCGG CGATCCGGTG 
CAGTATATTA TTCACTACAC CGGCATGGGC GCGATTAATA GCCTATTAGC GACGTTGCTT 
ATTTCACCTA TCGCCAAGCG ATTTAAAATA GCAGCGCTGA TGCAAACTCG TCGTTTGGTG 
GGCTTGTATG TGTGCGCCTA TGCGCTGCTG CACATCAGTG CGTTTATTAG CTTAGATTTG 
CTGTTTGCGT GGGGATTATT GTTTGAAGAG GTCATAAAAC GACCTTATAT TTTGGTTGGT 
GCTGCAACCT TGATTATCAT TTTATTACTG GCGATAACCT CTCCCAATCG TATAAAACGC 
AGTATGGGGA AACGCTGGCA ATTATTGCAT AATTGGATTT ATCTGGCGGC AATACTGGCA 
CCAATTCATT TTTATTGGTC GGTAAAGTCT GAAATTATCG AACCCAGCAT TTATATTGCG 
CTATTTGCGG TGCTATTGTT TTACCGCAAA GACAGTATTT ATAAATGGTT GAAGTCGAAA 
AAATAA
 
Protein sequence
MRISPRGLFW LKVLLHISFL LPAFYLVALV LTDNAGGDPV QYIIHYTGMG AINSLLATLL 
ISPIAKRFKI AALMQTRRLV GLYVCAYALL HISAFISLDL LFAWGLLFEE VIKRPYILVG 
AATLIIILLL AITSPNRIKR SMGKRWQLLH NWIYLAAILA PIHFYWSVKS EIIEPSIYIA 
LFAVLLFYRK DSIYKWLKSK K