| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2377 |
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| Symbol | |
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| ID | 4279288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2832285 |
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| End bp | 2833661 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638135173 |
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| Product | FHA domain-containing protein |
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| Protein accession | YP_751060 |
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| Protein GI | 114563547 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3456] Uncharacterized conserved protein, contains FHA domain |
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| TIGRFAM ID | [TIGR03354] type VI secretion system FHA domain protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGAAG ATGTAATAGA AATGGAATTA TCGCTAGAGA TTGTGAGTTA TCACAGGTTA
TCCCCTGAGC AAGTCATAAC AAAAGATGTC ACAGACACCT TAACGTTAGG GCGCTCTGAT
GTATGTGACT GGCACATGCC TGATCCTGAA AAAGTGGTAT CTGGTACTCA TGCTCGGATC
ATTAAGCGCA GTGATGACTT TTTCATTGAG GATTTATCAA CCAATGGGTT ATATGTCAAT
CGGGCTGTCG AAGCGTTAGG CGCCAATCGT GAACATAAAA TTGAACACGA TGATTTGTTC
ACTTTTGGTG ATTATGAGAT CAGCGCGAAG TTACAAATGT TAAATGTGAC CTCCAATAGT
CATGTTCAGC AAGATGTACA TGACGCACCG CCAGTAGCGA CTTTGCAGCA AAATAAAGTC
ATTCCAGCAG CTTCTTCTTC ATCAATGCTT GATACTGGGT TTGAGTCCGA TTTAGCAGGA
TTTGATTCTG CTATGTTATT GAACCAATCT CGACAACAAT CAGCAGGTCT CTCGCAGATT
AACGCTGATT TACAAGACCA TTTTCAACCA CCTGTTGCCA TTCCAGAAGA ATGGGATAAA
GATATTTTTG GGCAAGGCTC TCAAGCTCAT ACACAAGCAG ATACCCGGTC TGCTGTTCCG
CAAGAGCCCA TGCCTCAGGT TTCTCAAGCT TCAGTTAACC TTATCAAAGT GCCTGAAGTT
GTAAAAGCTG AGGTAAAAAA AGTGGCCCCC GAGGCACCCA ATACCAAGGC GTCAGTTAGT
ACTCTGGTAA GCCCAGCATC TGCATTAAGC AAAGCATTTT TCCAAGGTTT GGGAGTCAAT
GAACACGATT ATGTCAATGT GTTAACTGAA GAATTGATGT TTGAACTGGG CCAAAGCATG
CAGTTTATGT TGACAGGACT GATGGAATCA CTACGTCAAC GTTCAAAGCT GAAGACTGAG
TTTAGGATCA ATCAAACGAC ATTCCAGCAG CGTGAAAATA ATCCATTGAA ATTTTCGGCC
AATATTGATG ATGTATTTCA AAATTTATTT TTAAGGAAAA GTGCGAGTTT CTTGTCATCT
CAACAAGCTA TCACCGAAGC TTTTAATGAC GGTCGAAAGC ATGATACCGC GTTAACTGCA
GGCACATTAG GCGCTATCCG TGGATTGCTA AATCAATTAG ATCCTGAATT TATTGAAGCC
AAAAGTCAAA ATCAGTCGCT TACAGACATG TTAGTGCCGG GACAGAAACA AATGCGTCAA
TGGAAGGTAT ATAAAAGCTT ACATTCCAAT TTAAAAACAG AGTTTATGCA AGACAGTGCT
GCCGCATTAT CAGATGATTT TGTTAAAGCA TACGACAATA AAATTAAAAC ATTATAA
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| Protein sequence | MKEDVIEMEL SLEIVSYHRL SPEQVITKDV TDTLTLGRSD VCDWHMPDPE KVVSGTHARI
IKRSDDFFIE DLSTNGLYVN RAVEALGANR EHKIEHDDLF TFGDYEISAK LQMLNVTSNS
HVQQDVHDAP PVATLQQNKV IPAASSSSML DTGFESDLAG FDSAMLLNQS RQQSAGLSQI
NADLQDHFQP PVAIPEEWDK DIFGQGSQAH TQADTRSAVP QEPMPQVSQA SVNLIKVPEV
VKAEVKKVAP EAPNTKASVS TLVSPASALS KAFFQGLGVN EHDYVNVLTE ELMFELGQSM
QFMLTGLMES LRQRSKLKTE FRINQTTFQQ RENNPLKFSA NIDDVFQNLF LRKSASFLSS
QQAITEAFND GRKHDTALTA GTLGAIRGLL NQLDPEFIEA KSQNQSLTDM LVPGQKQMRQ
WKVYKSLHSN LKTEFMQDSA AALSDDFVKA YDNKIKTL
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