Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2224 |
Symbol | |
ID | 4279136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 2664605 |
End bp | 2665969 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638135021 |
Product | hypothetical protein |
Protein accession | YP_750908 |
Protein GI | 114563395 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0337124 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAC TGACGATATT ATCGGCAGCA GTGATGCTAG CACTGAGTGC ACCTGCTGCG CTGGCGAAAG TATCACAAGC TGATGCAGAC AAATTGGGTA CAACATTAAC CCCTATGGGT GCAGAAAAAG CGGCTAATGC CGATGGTTCA ATTCCAGCCT GGACTGGTGG TATTAGCAAG CCTATTGCAG GCTACAGTAA GGGTATGCAT CATCCAGATC CATTCCCAAC TGATAAAGTG TTATTTACCA TTACTAATGA AAATAAAGCC CAATACGCTG AGTTTTTAAC TCCGGGTCAG AAACAGTTAT TTGAAGTATA TCCAGATACT TACAAAATGA ATGTTTATGA AAGCCGTCGT ACTGCAGCTG TACCTCAATA TGTTTATGAT GCGACTAAAG CCAATGCTGT TAGAGCTGAA TTAGTTTCAC AAGGTAACGG TATTACTGGG GCGACCATTG GTGTGCCATT TCCAATTCCG GCTAACGGTT TAGAAGTGAT TTGGAATCAT ATTTTACGTT ATCGAGGTGT CGATGTAGAA ACATATCGTA GCCAAGCCGC GCCTATGTCA AATGGTTCTT ATACTCTGGT TGAAAACGCT GAGGAAATTC GTTTTGAATA TTCTCGTCCA GAGGTGACCT TAGAGAAGCT TAAAGAAACA AATACGTTGT TTTACTTTAA ACAAGTTGTT ACTCAACCAG CGCGACTCGC AGGTACAGCA CTACTTGTAA AAGAAACCAT GGATCAAGAA GCGCTTCCAC GCCAAGCTTG GACTTACAAC ACTGGACAGC GCCGCGTTCG TAAAGCTCCT AACGTAGCTT TTGATACTCC AGGTACTGTA TCTGATGGGT TAAGAACAAC AGATGATTTC GATATGTTTA ACGGCTCTCC AATCCGTTAT AACTGGGAAT TAGTTGGTAA AAAAGAGATC TACATTCCTT ACAATGATTA TCGTTTACAT TCAGATGCGT TGAAGTATGA CCAAATTTTA AAACCTGGTC ATATTAACCC TGAGTATCCA CGTTATGAAA AACATCGTGT ATGGGAAGTC AAAGCGACGT TAAAAGAAGG CATGCGTCAT ACTTATAAAA GTCGTGTTTT CTATATTGAT GAAGATTCAT GGCAAGTGGC GGTAACTGAT ATATATGATA ACCGCGATGA GCTTTATCGT GTGGGTGTAG CTCACCTTAT CAACTATTAT GAAGTGCCTG CGCTTTGGAG TACATTGGAA GTGTTCCATG ATCTTCAATC ACGTCGTTAT TTAGCGATGG GTCTAGACAA TGAAGGCCGT ATGTATAATT TTGATGCATC ACTTTCAGAG TCTAACTTTA CCCCAGACGC ATTAAGACGT GCTGGTATTC GTTAA
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Protein sequence | MKKLTILSAA VMLALSAPAA LAKVSQADAD KLGTTLTPMG AEKAANADGS IPAWTGGISK PIAGYSKGMH HPDPFPTDKV LFTITNENKA QYAEFLTPGQ KQLFEVYPDT YKMNVYESRR TAAVPQYVYD ATKANAVRAE LVSQGNGITG ATIGVPFPIP ANGLEVIWNH ILRYRGVDVE TYRSQAAPMS NGSYTLVENA EEIRFEYSRP EVTLEKLKET NTLFYFKQVV TQPARLAGTA LLVKETMDQE ALPRQAWTYN TGQRRVRKAP NVAFDTPGTV SDGLRTTDDF DMFNGSPIRY NWELVGKKEI YIPYNDYRLH SDALKYDQIL KPGHINPEYP RYEKHRVWEV KATLKEGMRH TYKSRVFYID EDSWQVAVTD IYDNRDELYR VGVAHLINYY EVPALWSTLE VFHDLQSRRY LAMGLDNEGR MYNFDASLSE SNFTPDALRR AGIR
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