Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2213 |
Symbol | |
ID | 4279125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 2648356 |
End bp | 2649336 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638135010 |
Product | transcriptional regulator, LysR family protein |
Protein accession | YP_750897 |
Protein GI | 114563384 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACTA TTCATAGTTG TGTGTTGCAA ATTCATTTAA CAATAGAGAC CAAAATGGCA GATACCAAAG CAATTCAGCA GCTTGACCTT AATTTGTTAA AAATATTTGA AGCTCTTTAT TCGGAGCAAA ATATGACTTT AGCGTCAAAG TCGTTGTTTA TAACGCCTTC AGCAGTGAGC CATGCGATAA AACGATTACG TTTAGTGTTA AACGACCCGC TGTTTGTACG CCAAGGTCTG CAAATGCAAC CAACAGCAGC TTGTCAACGT ATGGCTCCGC AACTTATTAG TGCGCTAAAT CGAATAAGGC AAGTACTGCA GCAATGTGGT GAATTTGACC CGCTTACTAC GGAGCAAACT TTTAAAATAG CCATTCATGA AGCGCTAGAA AGCCAAATAA TGCCAACGCT GATTAAGCAA GTTGTGAAGT TAATTCCGCA TGCGAAAATA GCCAGTATGT CATTATCTCG GGAAAATATA GCGCGTCAGT TAGCCAATGG GGAGGTGGAT TTAGCCATTG ATGTTGCGAG AGCGGTGAAT GCCCCTTTAG CTCACAAAAC CCTATTGTCA GATCCATTTT GTGTGTTGAT AGACCGTCGA CAACATGCAA TGCATTTAGA GCCTAGTACC AAATTGACTC CGACTGATTA TGCTAATGCT GAACATGTAG CCGTATCAAG CAGACCTATT GGTCGAGTGA TGGAAGATAT ATTGTTACAA CAACAAGGTG TAAATCGGCA CATTAAATAC CGATGCCAGA GTTACCAAAC CGCTGCTAAA ATTGTCATCG GGTCGCCTTT AATGTTGACC TTACCGCGCT CTATAGCGGA GCAGTTTATA CATCCAGATT TACATGTGTG CACCATGCCA TTTGAACTAC CGGACATTGA TACTCATTTA TACTGGCACA TGAATACTGA AACGGATCCC GCATTTGTTT GGTTAAGAGC ACAAATTGAG ATGGCGATCA TTGCAGAATA A
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Protein sequence | MNTIHSCVLQ IHLTIETKMA DTKAIQQLDL NLLKIFEALY SEQNMTLASK SLFITPSAVS HAIKRLRLVL NDPLFVRQGL QMQPTAACQR MAPQLISALN RIRQVLQQCG EFDPLTTEQT FKIAIHEALE SQIMPTLIKQ VVKLIPHAKI ASMSLSRENI ARQLANGEVD LAIDVARAVN APLAHKTLLS DPFCVLIDRR QHAMHLEPST KLTPTDYANA EHVAVSSRPI GRVMEDILLQ QQGVNRHIKY RCQSYQTAAK IVIGSPLMLT LPRSIAEQFI HPDLHVCTMP FELPDIDTHL YWHMNTETDP AFVWLRAQIE MAIIAE
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