| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2113 |
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| Symbol | |
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| ID | 4279025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2515718 |
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| End bp | 2516062 |
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| Gene Length | 345 bp |
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| Protein Length | 114 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638134902 |
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| Product | hydrogenase expression/synthesis, HypA |
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| Protein accession | YP_750797 |
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| Protein GI | 114563284 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) |
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| TIGRFAM ID | [TIGR00100] hydrogenase nickel insertion protein HypA |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00315228 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCACGAAT ACTCGATTGT AATGTCATTA ATGGAACAAT GTGAAGCGCT TGCACAGCTG
CATAAAGCCA CACGAATTGA GCAAGTTGAA CTGAAAATTG GGGTGCTAAG TGGCGTTGAG
CCAGCCCTAC TGTCGAAAGC GTTTGAAACC TTTAAATTGG ACAGTGTTTG TCATGAGGCA
AGATTAGTTA TTAATGTGCA GCCATTAGTG TTGCAGTGCA ATCACTGCGA ACAACAATCG
CAAGTAGATG AACGAACCAT TGTTTGCCCT ATTTGCCAGT CTAATAAAAC CACCGTGATT
GACGGTGAAG ACATGATGTT AATGCAGCTT GTGATGGATA CGTAG
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| Protein sequence | MHEYSIVMSL MEQCEALAQL HKATRIEQVE LKIGVLSGVE PALLSKAFET FKLDSVCHEA
RLVINVQPLV LQCNHCEQQS QVDERTIVCP ICQSNKTTVI DGEDMMLMQL VMDT
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