Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2032 |
Symbol | |
ID | 4278944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 2405511 |
End bp | 2406893 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638134821 |
Product | aldehyde dehydrogenase |
Protein accession | YP_750716 |
Protein GI | 114563203 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.187325 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACATATG AAACACGCAA TCCTTACACT GGTGATCTTC TGGTAACGTT CCCAGACGCA AGCGACTCAG AAGTAAAGCA AGCAATTGAA AATGCGCATG ATGCTTTTTT ACTTTGGAAA AATACTGGGT TTACTGAGCG TGCGCGCATA ATGCACGCCG CCGCCGAATT ATTACGCCGT GACGTTGATT ATTATGCCAA TCTGCTCACC ATTGAGATGG GTAAGCTTAT ATCCGAAGCC AAAGCCGAAA TAGCGTTGTC AGCAGATATC TTCGACTACT ATGCAGATAA CGCACAGAAA TTGCTGGCAC CACAAAAGCT ACCGGTTGCC GACGCTGATG CGGAAATTTT GTGTGAGCCG CTGGGTGTAT TATTGGCGAT TGAACCATGG AACTTTCCTT TCTATCAGGT TGTGCGTATT GCTGCACCGC AAATATCTGC TGGTAATACC TTGTTGCTCA AGCACGCGTC TAACGTTCCG CAGGCTGCTG CCGCATTCGA AAAATTAATG CTCGATGCTG GTTTGCCTCA AGGTGTGTTT AAGAATCTGT ATGCTACACG GTCACAGATA GAAACTATCA TTAACGATCC GCGTGTTCAG GGCGTAGCAT TAACGGGGTC TGAAGGGGCT GGTGCAGTTG TTGCCGCACA GGCAGGCAAG GCTTTGAAGA AATCGACCCT TGAACTTGGC GGTGCTGATG CATTCGTTGT TTTAGCCGAT GCAGATATGC AAAAAACGAT TAACTGGGCT GTTCTAGGTC GACATTGGAA TGGAGGTCAG GTTTGTGTGT CATCAAAACG AATGATCATT GTTGATGAGG TGTATGATCG GTTCCTCGAA GGTTATATCG GTAGTGTTGT AAATCTTAAA GCGGGCGATC CGTTTGAACC AAGCACAACG CTAGCACCAC TGTCATCTAA GGCGGCAGCC GATGAAATCA AAGACAAGAT TCGCCAGGCG GTTTCTTACG GGGCTACAGC AACTGAGGTT GGGCCAATTG TTCCCGATTC AGGCAATTTC GTTCAGCCGA CCATATTGAC TGACGTTGCA GAAGATAACC CTGCACGCTA TTGGGAATTT TTCGGTCCTG TTTCTATGCT GTTTCGCGCC AAGGATGAAG ATGACGCGGT TCATATAGCC AATGATTCAC CGTTCGGTTT GGGCGGTTCG GTATTTACTG CCAACCCAAT CCATGGTGCA GAAATTGCGA AGCGAATATC CACAGGTATG GTCTTTGTCA ATCATCCAAC AATGGCTAAG GCGGATTTAC CATTCGGTGG CGTTAAACGT TCAGGTTACG GCCGCGAGCT GGTCGGTCTT GGCATCAAGG AATTTGTTAA CCACAAACTT ATCGCCATTG TCGACATCGA CGCTCCGTTC TAG
|
Protein sequence | MTYETRNPYT GDLLVTFPDA SDSEVKQAIE NAHDAFLLWK NTGFTERARI MHAAAELLRR DVDYYANLLT IEMGKLISEA KAEIALSADI FDYYADNAQK LLAPQKLPVA DADAEILCEP LGVLLAIEPW NFPFYQVVRI AAPQISAGNT LLLKHASNVP QAAAAFEKLM LDAGLPQGVF KNLYATRSQI ETIINDPRVQ GVALTGSEGA GAVVAAQAGK ALKKSTLELG GADAFVVLAD ADMQKTINWA VLGRHWNGGQ VCVSSKRMII VDEVYDRFLE GYIGSVVNLK AGDPFEPSTT LAPLSSKAAA DEIKDKIRQA VSYGATATEV GPIVPDSGNF VQPTILTDVA EDNPARYWEF FGPVSMLFRA KDEDDAVHIA NDSPFGLGGS VFTANPIHGA EIAKRISTGM VFVNHPTMAK ADLPFGGVKR SGYGRELVGL GIKEFVNHKL IAIVDIDAPF
|
| |