Gene Sfri_1993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1993 
SymboltorD 
ID4278905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp2363578 
End bp2364234 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content42% 
IMG OID638134780 
Productchaperone protein TorD 
Protein accessionYP_750677 
Protein GI114563164 
COG category[R] General function prediction only 
COG ID[COG3381] Uncharacterized component of anaerobic dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.215454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGACA AGATATTGTA TAACACGCCA ATGAACCAGG GTCGTTCGAT GGTGTATAAG 
CTGCTCTCAT CACTGTTTGC AAAAGAGCTA GACCAACAGC TATTACAAGA GCTAACTGCA 
AGTCAGGCTC AGGCATTCTT TGCTCAATTG GCCAGTGACC CGTTATTGAG TCAAGACATT 
GAAACCATAA ACTCAGTGCT TAATTCAACC CTTAACAGCG TCAATACTGA TCATGCTTTA 
TTAGAGCTTG CTGCCGATTA TTGTGGCCTA TTTTTAGTAG GTACAAAGCA TAGCGCCAGT 
CCTTATGCCA GTTTATATCT TAACGATAAT GCAGTTGCCA AGGACGACAT ACTCTTATTT 
GGTGAACAGC ATCAGCAAAT GCAAACATAT CTAAAACAAA GCCAATTAAC GGTTCAAAGT 
GAATTTCCTG AACCGTCTGA CCATATTGCC GTTATTTTGG CTTATGTCGC TCACCAAGCG 
TGTGCTTGTG ACGATAACAC TCAGCTCAGC TTTATTAGGC AATATCTCCA CGCTTGGTTA 
CCCCGTTTTG TAGATAGACT TACCTCTGTG GATACTGGTC AGTTTTATTC AGCCATTGCT 
CACCTCACTC TGGCTTGGGT TGAAAGCGAT TGTGTAGGAC TAAAAGGTGC TCAGTAA
 
Protein sequence
MNDKILYNTP MNQGRSMVYK LLSSLFAKEL DQQLLQELTA SQAQAFFAQL ASDPLLSQDI 
ETINSVLNST LNSVNTDHAL LELAADYCGL FLVGTKHSAS PYASLYLNDN AVAKDDILLF 
GEQHQQMQTY LKQSQLTVQS EFPEPSDHIA VILAYVAHQA CACDDNTQLS FIRQYLHAWL 
PRFVDRLTSV DTGQFYSAIA HLTLAWVESD CVGLKGAQ