| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1992 |
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| Symbol | |
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| ID | 4278904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2360439 |
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| End bp | 2363438 |
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| Gene Length | 3000 bp |
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| Protein Length | 999 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134779 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_750676 |
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| Protein GI | 114563163 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR02956] TMAO reductase sytem sensor TorS |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.721903 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGGCAT TTTGTCTGCT CGGATTGTTA TTGTTAATGT TAGTTAGCCT TGGCAGCATT
TCGCTTTATT GGGTAAAGCT GGCTGACCAA TATTTATATG AAGAGGCGTT ACCCGCATCT
GAGGCTGCAA GGCAATTGAT GCAGTCTTCT AATGGCTTGC TCGACAATGC CCAAGCGCTG
GAACGAGTGG AACAAGAGGC ACAACGCGTT TTCCTTGGTC GTAAGTTGTC ACTCGAAAGC
ACTAATTTAC TTTCCGCTAT TGAACGACTC AATTCGTTAA ATCTACAAAA TCATGGTGTC
GATAAAGATA AGCAATTAGC GCTATTAGCT GGTGAAATTA TCCATGACTT ATCGGTATTC
GGCCGCCAAG TGGGTAAACG TTTAGTGTTG GCGGCTCAAT TGAATAATAA AGGAAGCGCA
CTCGCGGAAG CAGCCAGTAA GAGTAGTGTT TTACTTGAAG CAGAACAAGC TGTGGTCGAT
TCAACCATTC TGGCCAAGTT GAGTTTAGCT TACCCTCAAG TGGTTGGTGC TGAACAAAGT
GCCCAACTTT TGGACTCCAT CATAGAACAA GACTTGGATG TCCGTGAACG TTTAAATCGA
GCTTTGGGAT TGATCCATCA CATTGAGTTA GTAGGGCAGT TATTACAGTC TCCAGAACAA
CAACTTGGAT TAAATAACGT ACTCGACAAT ATGGCTCGAG TACTGTCTCC AACGACTTAT
ACCATTAATT CTACTCGCGA TAACTCCCAA AACGGTAATG AAATACCGAG CCCTTATACT
GCTTCAGGCA CGAGTGGGCA AATTGATTTA ATGCCTCTAG AATTACTTAA AGGCTTAATT
CGAGATCCGG TTAGAGCGAC AGAGCTTGAG CACCAATTGA TAATGTTAAG GGAGGTGAAT
GTTGGCTTAA GTTTGCAGCA GCAATATGCT CAATTGCTAA CGAAACAAAA TGCGCAGCTG
TTAACGCTGA CGGATAAATT AGGCCAACTG AATAAGTCAG TCGATAGCGC AATGAAAGCA
CAACAGCTAC AGGCAGAACA TGCCCGAAGT AATTTTTTAC AGCAATTACT GTGGGCTAAA
TCAGGACTGT GGGCGACAGG TATTTTGATG TTAATCATTA TGCTGTTGGT GGTTTATCGA
GTTATTTATA AAGGTATAGC TTTACGCCTA AGTGAAGCAA CTGCAGCATT ATCTCAATTA
AGTCAGGGCA ATACCGAAGT AGTACTTGAT CCTCACGGAG ACGATGAACT CACCGCGATG
GCTTCTGCCA TTGAAGCTTT TAAACAAAAA ACCGCGCACA ATCAAGCACT GCAATCTGAA
TTACAACAAA CGGCATCAGA ATTATTTGCC CATAAAGCCT CACTTGAAAG TACCGTGCAG
GCACGTACAC TCGAACTGGC TGAAACCAAC CGTCAACTAG ACGCTGAAGC AAAAGGGCAT
TCGACGGCTA GAGTGATGGC AGAACAAGCT AACAAGGCAA AATCGCTATT TTTAGCGACC
ATGAGCCATG AAATCCGTAC TCCGCTAAAT GGTCTTTTAG GCACCCTGAC TTTACTGAGT
CACTCGCCAT TACCTCCAGC ACAAAAACAA ATGTTGGCAT TATCGCAATA CAGCGGCACC
TTACTGCAAA ATGTACTTAA TGATATTTTG GACTTTTCCC GTTTGGAGCA AGGTAAATTA
ACTAACGAAC CACGGGCTGT TGCGCTTAAT GAGCTGCTCG ATGAAGTGAT GGCAATCATG
TTAGCTGGTG CGGGATTGTC AGGTATCTCG TTATATTTAG TTCGCGGTAA TTTACCTAAA
TGGATAACGG TAGATGGCCC CAAATTGCGC CAAGTGTTGT TTAATTTGCT CGGCAATGCC
ATTAAATTCA CTCCAGCAGG AGAGGTTACA TTACGGGTAA ATGTGGTCGA AAAACGATTA
ACCTTTGAAG TGGCAGATAC TGGCGTTGGC ATAAGTAAAA AGGCCATGGA TCAATTGTTT
ATCGCCTATG GTGCACAGCC TAATCAAGGC AGAACCAGAG GCACAGGACT CGGGCTCGCA
ATTTGTAAAG AATTAGTCTC GTTAATGAAT GAGGTTAATA CTGCCAATGA TTCTATTTGG
GTCAATAGTA AAGTGGGTGA GGGTTCCACC TTTGGTTTTA GTTTGCCATT GCACATCTGT
GAGCAAGAAC ATGAGGTTAT CTGTGCAACA TTACCTAAAG TTGATCCTAA ATGTGTACTC
GTTATCGAAG ACAACAAAGT CAATTCCATG GTGGCCCAAG GGTTTTTAGC ACATCTTGGA
CATCATTCCG TACTGGCTGA TAGTTGTACT CAAGCAAGAG CGTTGTTTAA CGTCGATAGT
GCGTTGCAGT TTGACGGCAT TATGCTTGAT ATTCAATTAG GTGATGGCTC AGGAATTGAG
TTATTAGTAG AGTTGAAGAA TATTGCTAAT GCAGCCAAAA AAAACATCAG CATAGCCGCT
TTTACGGCAC AAATTCAACA TGATGACATA AACGAGTATC GAGCAGCGGG CTTTGACGAC
GTATTAGCCA AACCGCTTAA TATGAAGTTT TTAGCCAATT GGATTGGTGA TGCAAGTGAC
AAGTCAGCAA TCAACAGCGA CAACACGAAT AAGTTAACTA AGATGGATAA ACACAAAGGC
TTTACACAAA CGACCATAGA TCAAAAATTT TCAGTTGGTA ATGAAGACAA TCAGCCTTTA
CTCGATGAAA AGCAAATTAA TGAAGACTTA CAATATCTTG GTACAGAAGC TGTTAAAGAG
ATGTTAGCGT TATTTAAAGT CAGTAGTACA CAACACATCA ATGCACTGGC AGCTTTACCT
ACAGATAGGC CAAAAGTGTT ACACGCACTT AAAGGCAGTA GTGCCAGCAT TGGCTTTATT
CAGTTGAGTC AGTTGTGCAA ACAATTAGAA AAAGATGGCA TTAGTGATGA TTCATATTTG
TTGCTTAAGC AAGTATTGCA AGCATCCATT AACGCACTTG AGTTGAAAAT CTCTATCTAA
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| Protein sequence | MLAFCLLGLL LLMLVSLGSI SLYWVKLADQ YLYEEALPAS EAARQLMQSS NGLLDNAQAL
ERVEQEAQRV FLGRKLSLES TNLLSAIERL NSLNLQNHGV DKDKQLALLA GEIIHDLSVF
GRQVGKRLVL AAQLNNKGSA LAEAASKSSV LLEAEQAVVD STILAKLSLA YPQVVGAEQS
AQLLDSIIEQ DLDVRERLNR ALGLIHHIEL VGQLLQSPEQ QLGLNNVLDN MARVLSPTTY
TINSTRDNSQ NGNEIPSPYT ASGTSGQIDL MPLELLKGLI RDPVRATELE HQLIMLREVN
VGLSLQQQYA QLLTKQNAQL LTLTDKLGQL NKSVDSAMKA QQLQAEHARS NFLQQLLWAK
SGLWATGILM LIIMLLVVYR VIYKGIALRL SEATAALSQL SQGNTEVVLD PHGDDELTAM
ASAIEAFKQK TAHNQALQSE LQQTASELFA HKASLESTVQ ARTLELAETN RQLDAEAKGH
STARVMAEQA NKAKSLFLAT MSHEIRTPLN GLLGTLTLLS HSPLPPAQKQ MLALSQYSGT
LLQNVLNDIL DFSRLEQGKL TNEPRAVALN ELLDEVMAIM LAGAGLSGIS LYLVRGNLPK
WITVDGPKLR QVLFNLLGNA IKFTPAGEVT LRVNVVEKRL TFEVADTGVG ISKKAMDQLF
IAYGAQPNQG RTRGTGLGLA ICKELVSLMN EVNTANDSIW VNSKVGEGST FGFSLPLHIC
EQEHEVICAT LPKVDPKCVL VIEDNKVNSM VAQGFLAHLG HHSVLADSCT QARALFNVDS
ALQFDGIMLD IQLGDGSGIE LLVELKNIAN AAKKNISIAA FTAQIQHDDI NEYRAAGFDD
VLAKPLNMKF LANWIGDASD KSAINSDNTN KLTKMDKHKG FTQTTIDQKF SVGNEDNQPL
LDEKQINEDL QYLGTEAVKE MLALFKVSST QHINALAALP TDRPKVLHAL KGSSASIGFI
QLSQLCKQLE KDGISDDSYL LLKQVLQASI NALELKISI
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