Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1980 |
Symbol | |
ID | 4278892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 2346796 |
End bp | 2347548 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638134767 |
Product | hypothetical protein |
Protein accession | YP_750664 |
Protein GI | 114563151 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGATAC AAGCAATCAT TGGCGCATTA TTAATTGGTT TAGTGCTGAG TGTATTAGGG TCTGGTGGCT CCATTCTTAC TGTTCCGGTG TTGCTTTACC TTATTGGAAT GCAACCCCAA TTAGCTATCG CTTCGTCATT GTGCATTGTG GGTGCCATCA GTTTAATCAG CAGTATGGGC TTTATTAAGC ATAAAAAGGT CTCTTGGCCT CATGTGCTTT TGTTTGGTTT ACCGGGCATG GCAGGCACCT ATTTAGGCGC ATGGTTAAGC AGCTTTTTTA GTAGCGACAT ACAACTCACT GTGTTTGTCA TTTTGATGCT CATTGGCGCG GTGATGATGT GGCGAAATCA ATCTAGCCGC TACCAAGCTG GCAAACTGAA TATTGCTAAA ATCTTGTCGC AAGGATTAGC GGTTGGTGTT GTCACCGGTT TTGTGGGTGT AGGTGGTGGT TTTTTAATTG TGCCTGCACT GGTGTTACTT GGCGGCATTG AAATGTCGCT GGCGATTGGT ACCAGCTTAC TGATTATTTC AATGAACTCA CTGGTCGGTT TTGCTAAATA TTACTCATTA CTTTCAAGTA AAGGGTTTGA GTTCGATTGG TCGATTATTG CCATCATGAT TGCTGGCGGA CTTGTCGGCA GTATTGCCGG CCAATGGATA AACCAATATT TACCCAAAGC GGTTTTACAA AAAATATTTG CCGTTTTTTT AGTGCTAATG GCGCTATTCA TTGTAACTAA ATCCATTATT TGA
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Protein sequence | MMIQAIIGAL LIGLVLSVLG SGGSILTVPV LLYLIGMQPQ LAIASSLCIV GAISLISSMG FIKHKKVSWP HVLLFGLPGM AGTYLGAWLS SFFSSDIQLT VFVILMLIGA VMMWRNQSSR YQAGKLNIAK ILSQGLAVGV VTGFVGVGGG FLIVPALVLL GGIEMSLAIG TSLLIISMNS LVGFAKYYSL LSSKGFEFDW SIIAIMIAGG LVGSIAGQWI NQYLPKAVLQ KIFAVFLVLM ALFIVTKSII
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