| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1859 |
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| Symbol | |
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| ID | 4278319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2196179 |
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| End bp | 2198791 |
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| Gene Length | 2613 bp |
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| Protein Length | 870 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638134642 |
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| Product | aconitate hydratase |
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| Protein accession | YP_750545 |
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| Protein GI | 114563032 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1048] Aconitase A |
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| TIGRFAM ID | [TIGR01341] aconitate hydratase 1
[TIGR02333] 2-methylisocitrate dehydratase, Fe/S-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTATTG TGGATGAAGT TATGAATACT CAATACCGTA AAGCCTTACC TGGCACCCAA
TTAGATTATT TTGACACCCA AGAGGCTGTT GATGCGATTG AGCCTGGTGC CTATGCCAAA
CTACCTTATT GTTCTCGTGT GTTTGCCGAG AACCTAGTTC GTCGTTGTTC GCCAGATATG
CTTATTGATT CGCTAAAGCA GCTGATTGAG CGCAAAAGTG ACCTTGATTT CCCGTGGTAT
CCGGCCCGTG TGGTTTGTCA TGATATTTTA GGTCAAACTG CATTAGTCGA CTTAGCAGGC
CTGCGTGATG CGATTGCTGA AAAAGGTGGC GACCCCTCAA AAGTGAACCC AGTAGTACCG
ACTCAATTGA TTGTCGATCA CTCGCTGGCT GTAGAGCATG CTGGTTTTGA AAAAGACGCG
TTTGAGAAAA ACCGCGCCAT TGAAGACCGC CGCAATGAAG ACCGTTTCCA TTTCATCAAT
TGGACCAAAA CGGCATTTAA AAACGTTGAT GTTATCCAAC CGGGTAACGG CATCATGCAT
CAAATTAACT TAGAGCGTAT GTCGCCTGTA GTACATTCGC TAAATGGTGT CGCGTTTCCT
GACACATTGG TAGGTACCGA CAGCCATACA CCTCATGTAG ATGCATTAGG TGTTATTGCC
ATTGGTGTGG GCGGCTTAGA AGCTGAAAGC GTCATGCTCG GCCGTGCATC TTATATGCGT
TTACCAGAAA TTGTCGGTGT TGAAGTAACG GGTAAACCGC AACCTGGTAT TACCGCTACC
GATATAGTGC TGGCGTTAAC GGAATACTTA CGTGCGCAAA AAGTGGTGTC ATCGTATCTT
GAGTTTTATG GCGAAGGTAC CACCCATTTA ACCCTTGGCG ATCGCGCTAC TATTACTAAT
ATGACGCCTG AATACGGCGC TACCGCGGCG ATGTTTTATA TCGATAGACA AACTATCGAT
TATCTAACGT TAACTGGCCG TGACGACGCG CAAGTTAAAC TAGTTGAAAC CTATGCCAAG
CAAGCGGGTT TATGGGCTGA TACGTTAACG AATGCTGTGT ATGAACGTGT ATTACACTTT
GACTTGTCAT CTGTTGGTCG TAACATTGCA GGCCCGTCTA ACCCACACAG TCGTGTACCG
ACATCTGAAT TAGCGGCGCG TGGTATTAGT GGCGTGGTTG AAAACGAACC CGGTAAAATG
CCCGATGGTG CAGTGATTAT TGCTGCGATT ACCAGTTGTA CTAACACCAG TAACCCACGC
AACATGATTG CTGCCGGTTT ATTGGCTCGC AATGCCAATG CCCGTGGATT ATTACGTAAA
CCTTGGGTGA AATCATCGCT TGCGCCTGGC TCTAAAGCAG TGCAATTGTA TTTAGAAGAA
GCAGGTTTAT TGCCTGAGCT TGAAAACTTA GGGTTTGGCA TTGTCGGCTT TGCCTGTACC
ACGTGTAACG GCATGAGCGG CGCGCTTGAT CCGGTTATTC AACAAGAAGT GATTGATCGC
GACTTATACG CTACTGCAGT ATTGTCGGGC AATCGTAACT TTGATGGCCG TATTCATCCT
TATGCTAAGC AAGCATTTTT AGCATCTCCA CCTTTGGTTA TTGCTTACGC CATTGCCGGT
ACGATTCGTT TTGATATTGA AAAAGATATT TTAGGCATCG ATAACCAAGG TCAAGCGGTT
ACGTTGAAAG ACATATGGCC AACCGACGAA GAAATTGATG CAGTTGTTAA AGCAAGCGTT
AAGCCTGAAC AATTCCGTAA AGTGTATGAG CCAATGTTCG ACATTAAAGT CGAGTATGGT
ACTCACGTAA ATCCACAATA TGATTGGCGT CCGCAAAGCA CTTATATTCG CCGTCCACCT
TATTGGGACG GAGCATTGGC GGGTAAGCGC ACCATGAAAG GTATGCGTCC ATTAGCAGTG
CTTGGAGACA ACATCACCAC CGATCATTTA TCGCCATCAA ATGCGATTAT GCTCGACAGT
GCCGCAGGTG CATATTTACA CAAAATGGGC TTGCCTGAAG CTGACTTTAA CTCTTATGCC
ACTCACCGTG GCGATCACTT AACTGCGCAG CGTGCCACCT TTGCTAACCC TAAACTGTTT
AACGAAATGG TGCAGGAAAA TGGCAAGGTT AAGCAAGGAT CACTTGCGCG CATAGAACCT
GAAGGCCAAG TCACTCGCAT GTGGGAAGCG ATTGAAACCT ATATGGAACG TAAGCAACCA
CTGATTATTA TTGCTGGTGC AGATTACGGT CAAGGTTCGT CACGTGACTG GGCTGCAAAA
GGCGTGCGCC TTGCTGGGGT TGAAGTGATT GTTGCTGAAG GCTTTGAGCG TATTCACCGC
ACTAACTTGG TGGGTATGGG CGTGTTACCG CTTGAGTTCA CTGCAGGTCA TAATCGTCAT
ACTTATCATA TTGATGGCAC GGAAACCTAC GATGTGGTGG GCGAACGCAA ACCGGGCGCT
ATGTTAAATG TGATTATGAC TCGTAAAAAT GGTGAACAAG TGACCATTCC GGTTAAGTGT
CGTGTTGACA CTGCCGAAGA GTTGTCAATT TATGAAGCGG GTGGTGTATT ACAACGTTTT
GCTCAGGACT TTTTAGCTAA CGAAACCAAG TGA
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| Protein sequence | MFIVDEVMNT QYRKALPGTQ LDYFDTQEAV DAIEPGAYAK LPYCSRVFAE NLVRRCSPDM
LIDSLKQLIE RKSDLDFPWY PARVVCHDIL GQTALVDLAG LRDAIAEKGG DPSKVNPVVP
TQLIVDHSLA VEHAGFEKDA FEKNRAIEDR RNEDRFHFIN WTKTAFKNVD VIQPGNGIMH
QINLERMSPV VHSLNGVAFP DTLVGTDSHT PHVDALGVIA IGVGGLEAES VMLGRASYMR
LPEIVGVEVT GKPQPGITAT DIVLALTEYL RAQKVVSSYL EFYGEGTTHL TLGDRATITN
MTPEYGATAA MFYIDRQTID YLTLTGRDDA QVKLVETYAK QAGLWADTLT NAVYERVLHF
DLSSVGRNIA GPSNPHSRVP TSELAARGIS GVVENEPGKM PDGAVIIAAI TSCTNTSNPR
NMIAAGLLAR NANARGLLRK PWVKSSLAPG SKAVQLYLEE AGLLPELENL GFGIVGFACT
TCNGMSGALD PVIQQEVIDR DLYATAVLSG NRNFDGRIHP YAKQAFLASP PLVIAYAIAG
TIRFDIEKDI LGIDNQGQAV TLKDIWPTDE EIDAVVKASV KPEQFRKVYE PMFDIKVEYG
THVNPQYDWR PQSTYIRRPP YWDGALAGKR TMKGMRPLAV LGDNITTDHL SPSNAIMLDS
AAGAYLHKMG LPEADFNSYA THRGDHLTAQ RATFANPKLF NEMVQENGKV KQGSLARIEP
EGQVTRMWEA IETYMERKQP LIIIAGADYG QGSSRDWAAK GVRLAGVEVI VAEGFERIHR
TNLVGMGVLP LEFTAGHNRH TYHIDGTETY DVVGERKPGA MLNVIMTRKN GEQVTIPVKC
RVDTAEELSI YEAGGVLQRF AQDFLANETK
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