Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1847 |
Symbol | |
ID | 4278113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 2179865 |
End bp | 2182477 |
Gene Length | 2613 bp |
Protein Length | 870 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 638134630 |
Product | hypothetical protein |
Protein accession | YP_750533 |
Protein GI | 114563020 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.277811 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAGA ATCTGAAGCC AGAAACGATT ATTCCACAAG AGCTATATGT ATCAAGAAAT GCGGATAAAC AAATTAGAGA GTTAATAGGT AACATGGGCC GGCCTGGATA TATTTTGGTC TCTCGACAAA TGGGGAAAAC TAACTTATTA ATAAATGCTA AGAGAAATTT GGAGTCTGAC TCTGATATTA TTACTTATAT TGATTTGTCG AATAAACATG AAACTGCAAG AGATTGTTTT AGAAATATTG TCGATACAAT TGTTGAAACA AATCCTAATT TATTGGGAAG AGCAGAGTTA GATATTGCTG AAAGACGCGA GAACGTGAAA TCATCTGAAC ACAAAGAACA TAGCTATGAA CTTAGGCGTA TATTGAAAGA TGTAAAAGGT AAGTTGGTTA TAAGTTTAGA TGAAATTGAC TCTTTAACTC AAGCTGATTA TTCTGATAAG ATTTTTGCTC AAATAAGAAG TGTATACTTT GATAGAGTTA ATTTTAATGA GTTCAATCGA TTGACATATA TTTTGTCAGG AGTTGCTGAA CCTAGTGATA TAATAAAAGA TAGCTCTATA TCTCCATTTA ACATAGGTCA GAAGATATTT TTAGGTGATT TTTCTGCGGC TGAATATAAC GAGTTGCTAG TTAAGTCTGA TATGCATTTA GATGTTGAAG TTAAAGATAG AGTTTTTTAT TGGACGAATG GTAACCCTAG GTTGACATGG GAAATATGCT CTGAGATAGA GGATTTAGTC AATCAAGGTG TTGTATTAAC AGCAGTAAAT GTTGATAATA TTGTTGATGT TATGTACTTG AAAAACTTTG ACCGTCCGCC TGTAGATCAT ATTAGAACTC TGATATCGAA AGATGTAAAG CTTAGGGATG GTGTTATTGC TATTAAATAT GGCAAAGAAG AAAGCTTATC TGACGATGTT AAATCAAAGC TATACCTAGC AGGAGTACTT GATTCTAATT ACGAAGAAGG GACTATTCGG ATAAAAAATA GAATTATTGA TATGTCTTTA GAAGATGAAT GGCTTGCAAA TTTGGGTAAG ACTGAGTCGT TATCTATGGG AAATGCCGAT AGTTCATATT CTAACAAGGA TTATCCGATT GCAATAAGGC AATATGAAGA GCTTTTGAGT CGAAAAGATA ATTTAAGTTT TATTGAAGAA AACCAAATGT ACTACAAGCT AGCCGCGTGC TATCTTAAAG CTGAAAAATA TTATAAAGTT ATTGAATATA GCGAACTTTG CAAATTTAGT CTAAGTGAAA ACAAATCTAT TTGTTTAGAG TTGTTATGGA TGAAAGGAAG CTCATATGAA AAGACCAATA ATAATGAGTT GGCATTAAAA TGTTATAATG AAATCTTGGG TTTAGATTTT TCAACAAAAA GTGATATTTA TTTTAGAGCA AAATTAGATG CGATACTCCT TGAGTTAGTT GATTTTGACA AAGTTTCAGA AGAATCTGTA AATAATATTT TTGGAAACTT TGTTTCTGAA CTTCTAGAAG AGAGAGAGTC TGAAGAAAGT TCACTAAAGC CAATTGAAAT ATCATATTGG TTGTCTCTTT CTTACTATAC TGAAGGAAGG TTTAGATTAG ATCTTAAGAT GTTTGAAAAT GCAAGGTTTT GTTTTGAAAA CTGTCTTAAA CATGCTGATG ATGATGCTAA GTTTTTTCCG GTTTTTGAGT TAATGAAACT TATAAAGATA CTCAATCTTG AACTAGATGT GTCTAATTCA TATTTCGATA TCATTGTCGA TTTAGCTAGT AATAAAGAAA GAGTTGTATC ATTGGATTCA AATGACTTTA CAATTACAGG GAAGTTTATA AAAGACTTAA TAGTATACTC GGCAAAAGTT TTTGATGATG AAAAAACTCA ACTCCTCGTT GAAATATTCA GTCGCAATAT AAAAGTTAGT GGTGGTAATT TTTACTCTCT TGTTATTGAG TCTGCTAGCG AGTTTATTAA GTTAAGTGAT AATAAAAATA GTCTATTGTT GTTGAATTGT GTGTTTTCTG TTAATCGAAA GATCGTAGAT CCTGAGGAGT ATTTTTTCGC TTCTAAGTTT ATTTCATTTT TTGATCAAAA TAGTGATAGC GCTAAGAGTG TGTATTTTCA AGGATTTCAA AATTATGTGG AAATATCAGA TAATATAGAT ATAACAATAT TTGAACGTGA GATTATTCGT CTTAGAGGTA TTAGTGATTT TAAAAGAGGG GACGCATTGT GTGATATCGT TTTAAATTCT GATGGGAGTT TGAAAGGCGA TATTAGTGCG AGAATGATAC CTATCCTATT TTTGAAAATG TTAATTCATG ATTCTGCTGA AAAACGATTA CAATTTGCAT ATAAAATTAA TAGTAAACTA GATGAGGTGG ATTCTTCAGA GTATGAGAGT GCTAGGCTTA ATAGAAAGAT AGTTAATCAT TTTAAGTTGA ATGCAAATAG AATTATTTTT GAAAACACTC CAATTGAACA AGTTAAGTAT ACAAGCAAAA GATATAAGAG AAATGATAAG GTTAGGGTTA AGTTCTCTGA TGGAAAAGTG GAAATAAAAA AGTTTAAACA AGTTCAAGCT CAGTTGGAGA GTGGTGAGTG TGAAATAGTT TGA
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Protein sequence | MRKNLKPETI IPQELYVSRN ADKQIRELIG NMGRPGYILV SRQMGKTNLL INAKRNLESD SDIITYIDLS NKHETARDCF RNIVDTIVET NPNLLGRAEL DIAERRENVK SSEHKEHSYE LRRILKDVKG KLVISLDEID SLTQADYSDK IFAQIRSVYF DRVNFNEFNR LTYILSGVAE PSDIIKDSSI SPFNIGQKIF LGDFSAAEYN ELLVKSDMHL DVEVKDRVFY WTNGNPRLTW EICSEIEDLV NQGVVLTAVN VDNIVDVMYL KNFDRPPVDH IRTLISKDVK LRDGVIAIKY GKEESLSDDV KSKLYLAGVL DSNYEEGTIR IKNRIIDMSL EDEWLANLGK TESLSMGNAD SSYSNKDYPI AIRQYEELLS RKDNLSFIEE NQMYYKLAAC YLKAEKYYKV IEYSELCKFS LSENKSICLE LLWMKGSSYE KTNNNELALK CYNEILGLDF STKSDIYFRA KLDAILLELV DFDKVSEESV NNIFGNFVSE LLEERESEES SLKPIEISYW LSLSYYTEGR FRLDLKMFEN ARFCFENCLK HADDDAKFFP VFELMKLIKI LNLELDVSNS YFDIIVDLAS NKERVVSLDS NDFTITGKFI KDLIVYSAKV FDDEKTQLLV EIFSRNIKVS GGNFYSLVIE SASEFIKLSD NKNSLLLLNC VFSVNRKIVD PEEYFFASKF ISFFDQNSDS AKSVYFQGFQ NYVEISDNID ITIFEREIIR LRGISDFKRG DALCDIVLNS DGSLKGDISA RMIPILFLKM LIHDSAEKRL QFAYKINSKL DEVDSSEYES ARLNRKIVNH FKLNANRIIF ENTPIEQVKY TSKRYKRNDK VRVKFSDGKV EIKKFKQVQA QLESGECEIV
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