Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1841 |
Symbol | |
ID | 4278108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 2173025 |
End bp | 2173612 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638134625 |
Product | transcriptional regulator, TetR family protein |
Protein accession | YP_750528 |
Protein GI | 114563015 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAATA TTTCTAAATT TGATCGCGAA GACGTACTTG AAAGAGCAAA GAATCTGTTT TGGCAGAAGG GCTTTTTAGC CACATCCACG CGAGAAATTC AAACGGCTAT GGACATGCGA CCAGGCAGTA TTTATGCCGC TTTTGGTAGT AAAGCTGATT TATATCAAGC GTCACTTATG CGTTATGCCC AAGCTGGCGA ACAGAATTTA AATAACATGT TAGAACAGCA CGATCGTGCG TGGGTTGGAT TAACCCATTA TCTACGTGGA CTGATTAGAC CATGCTGTGA AGGTTCACCT AGCGAATTGT GCATGTTGGT AAGAACGTTA TCTGAATTAG ATGAATCTCA TCTTGATACA TTAAACGTTG CCCGTGAACT GCTCAGCAAA TTTGAACAAC GATTTGCCAG TATTATTGAC CAAGCTAAAC TTGAAGGCGA CTTACCTGCC CATTTAGACA GTCAACTTAC GGCTAAAAAA ATTCAAATCA ATATTATTGG TTTACGCTCT TATTTAAAAG CTACCGATGA CGTTGATATG GTGAGACAAC AGCAAGAAGA GTTTTTTACG CAACTCGCCA GCGTTTAA
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Protein sequence | MANISKFDRE DVLERAKNLF WQKGFLATST REIQTAMDMR PGSIYAAFGS KADLYQASLM RYAQAGEQNL NNMLEQHDRA WVGLTHYLRG LIRPCCEGSP SELCMLVRTL SELDESHLDT LNVARELLSK FEQRFASIID QAKLEGDLPA HLDSQLTAKK IQINIIGLRS YLKATDDVDM VRQQQEEFFT QLASV
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