| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1824 |
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| Symbol | |
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| ID | 4278092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2152471 |
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| End bp | 2153256 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134609 |
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| Product | extradiol ring-cleavage dioxygenase III subunit B |
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| Protein accession | YP_750512 |
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| Protein GI | 114562999 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3384] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.436879 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAACAAC ATCAAAACCC CCTGTTTATT TCGCATGGTT CTCCTATGAT GGCTGTTGAA
AACAGCAACA CATCGCGTTT TTTACAACGA CTAGGCCAAC AGCTCCCTAC CCCAAAAGCC
ATTGTGGTAT TTTCGGCCCA TTTAGATGTC ACTGACGATG TGGTGATTAC CGCTGGAGCG
CGTCCTGAAA CAATACACGA TTTTTATGGT TTCCCTGATG AACTGTATCA AATTCGCTAC
CCTGCACCTG GCGCACCTGT ATTGGCAAAA CAAATTGCCG ACACGTTTAT GAGTGCAGGT
ATTAAGGTCA ATTTATCTAT AACACAAGGT TGGGATCATG GCGTGTGGAT CCCACTGAAA
TTAATGCACC CGCAGGCGAA CATTCCCATT GTACAAATAT CCATTAATAC CCGTGTAAGT
GCAGCGCAAA ACTATCGTTA TGGACAGCTT ATAGCATCGT TAAAACACGA CAACATTCTT
ATCATTGGTT CTGGTGGAAT AAGCCATAAT TTAAGCGAGG TTTTTCGTCA GCCTAAAACA
CCCAATGGCG TTGATATGAT GAATCAATTC ACAAAGTGGG TTGAAGAGAA ATTAGTAAAC
AATGATACCG AATCGTTGTT GAGCTACATA CAGCTCGCGC CGTTTGCCCA GTTTAATCAT
CCGACTCAGG AACATTTTTT ACCGCTTATT GCTATTTTAG GAGCAAGTGA AGCAAGTGTT
GCCAAAAAAA TACATCAAGA TGTTGAGTAT GAATTGTTAG CACTCGATGC TTACTCGTTT
ACTTAA
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| Protein sequence | MQQHQNPLFI SHGSPMMAVE NSNTSRFLQR LGQQLPTPKA IVVFSAHLDV TDDVVITAGA
RPETIHDFYG FPDELYQIRY PAPGAPVLAK QIADTFMSAG IKVNLSITQG WDHGVWIPLK
LMHPQANIPI VQISINTRVS AAQNYRYGQL IASLKHDNIL IIGSGGISHN LSEVFRQPKT
PNGVDMMNQF TKWVEEKLVN NDTESLLSYI QLAPFAQFNH PTQEHFLPLI AILGASEASV
AKKIHQDVEY ELLALDAYSF T
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