Gene Sfri_1597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1597 
Symbol 
ID4277989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp1902512 
End bp1903213 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content41% 
IMG OID638134382 
Producthypothetical protein 
Protein accessionYP_750286 
Protein GI114562773 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.321672 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATAAGA GCGTATTAAC CAACCTTATC GCGGCTATCT TCATGCTGGT TGGGTATGTG 
TTACAACAAC AAATCGTCAT GACAATAGGG TTATTTGCGT TGTCGGGTGC ATTAACCAAC 
TGGTTAGCAA TCCATATGTT GTTTGAAAAA GTCCCCGGTT TATATGGTTC CGGTGTGGTT 
CCATCACGAT TTGAAGAGTT TAAAGCGGGC ATTAAACATT TAATGATGCA GCAATTTTTT 
ACTCAAGAGA ATATCGATCG CTTTTTGACA ACCAGCAGCG CCAGCAGTAT TGATTTAACC 
CCTGTGATTG AAAAGATTGA TTTAGCGCCA TCATTTGATG CATTAGTGTC GACTATCGAA 
AAGTCATCGT TTGGTGGCAT GTTAGCGATG TTTGGTGGTA CCGAGGCGTT GATCCCACTG 
AAAGAGCCGT TTATTGAAAA AATGAAACTG TCGTTAGTTG AACTGGCTCA AAGTGAAGAG 
TTCAATGCTA TTTTAGTCAA TGAGCTTGAA AAGCCGGATG TCATCGCAGA CATGCAAGCT 
AAAGTGGCCA ATATTGTGGA ACAGCGTTTA AATGAACTTA CGCCAGAATT AGTGAAACAA 
ATCATTCAAG ATATGATTAA AACCCATCTG GGTTGGTTAG TTGTGTGGGG TGGCGTGTTC 
GGTGGTATTA TTGGTGCCGT AGCGGCATTG CTGCAGCAAT AA
 
Protein sequence
MNKSVLTNLI AAIFMLVGYV LQQQIVMTIG LFALSGALTN WLAIHMLFEK VPGLYGSGVV 
PSRFEEFKAG IKHLMMQQFF TQENIDRFLT TSSASSIDLT PVIEKIDLAP SFDALVSTIE 
KSSFGGMLAM FGGTEALIPL KEPFIEKMKL SLVELAQSEE FNAILVNELE KPDVIADMQA 
KVANIVEQRL NELTPELVKQ IIQDMIKTHL GWLVVWGGVF GGIIGAVAAL LQQ