Gene Sfri_1578 details

Gene Information

• Locus tag: Sfri_1578
• ID: 4277970
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 1881722
• End bp: 1882387
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 638134363
• Product: hypothetical protein
• Protein accession: YP_750267
• Protein GI: 114562754

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.378933
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTGCGAT GGATTATATT TCTTTATAGC GTAGCTGTTT GTGTGAACGT GCAAGCTGCA 
ACCAATGTGA CTTTATTGAG TGATAACGGG ATTGAGAGTT GGGCTTCTAA AGTATTCTCT 
GGTGAATCAA TTTACAGCGT TGAAGACTAT AAAGGGCGCC TAGCATTAAA AGCACTCAGT 
CATCATTCTG CATCAGGACT GGTGCTAGAA AAGCAAATTG ACCTCATTGC AACGCCTTAT 
CTAAACTGGA GTTGGTTAGT TGAACAGACG TTGTCGCAGT TAGATGAGCA AAGTAAAGCT 
GGTGATGACT TTGTGGCGCG AGTTTACGTA GTTATTGATG GTGGTTTTAT GGTGTGGAAC 
ACCAAATCAT TAAACTATGT TTGGTCGAGT AATCAAGACA AAGGCTTGGT TTGGAACAAC 
GCTTTTGCTG GTTCAAGTGT TAAAATGATG TCTGTGCGAG GGCAACAATC GCAACAAGGT 
CTGTGGTATG AAGAAAAACG CAATGTGTAC CAAGATTTGA TTGAAACATT TGGGGATAAA 
GGCAGTCAAA AAGCTAACCG CAAAGCGTAT CAATACATCG ATATGATTGC GATTATGACC 
GATACCGACA ACAGTGGTAA AGATGCAGAA ACGTATTATG GAGACATAAT ATTTACTGAA 
AAATAG 

 

Protein sequence

MLRWIIFLYS VAVCVNVQAA TNVTLLSDNG IESWASKVFS GESIYSVEDY KGRLALKALS 
HHSASGLVLE KQIDLIATPY LNWSWLVEQT LSQLDEQSKA GDDFVARVYV VIDGGFMVWN 
TKSLNYVWSS NQDKGLVWNN AFAGSSVKMM SVRGQQSQQG LWYEEKRNVY QDLIETFGDK 
GSQKANRKAY QYIDMIAIMT DTDNSGKDAE TYYGDIIFTE K