Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1379 |
Symbol | |
ID | 4277003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 1640999 |
End bp | 1641892 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 638134154 |
Product | glycosyl transferase family protein |
Protein accession | YP_750070 |
Protein GI | 114562557 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.264212 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATAACT CTCAACATAC AATAGTTCGC GCTTTGGAAT CTATTGAAGT TCAGAGTGTT TTACCTGAGG TTGTCATTAT TATTGATGAT GGTTCAAAGG ACCAATCAAT TAGTGTTGTA CAGGCGTACA AGCGTGATTC ATCGCTAAAT ATAAAGATTT TGACACAAAA TAATTCTGGT CCATCTTCAG CTAGAAATAA AGGAATAAAT GCAGCGTCTG AATTTTTAAT TTCTTTTTTA GATGCTGATG ATGAATGGCA TCCTCTTAAA ATTGAGAAAC AGTTAGAGTT TTTTTTGAAA AAAAGTCAAA CATCACAAGT TGGGTTGGTT GAATGTTATA TGACGGATGT TTGCGGAGAC ATTGAAATCA AGCGAAATAC TCCAACACTT TCTGGACATC ATTTTCCTGA CTTTATATCC TCTAATGTGA TTAAAGGAAC GCCTTGTGTA ATGGTTCCTA AACATATTTT AGAATCTTAT GGTGGCTTTG ATGAATCATT ACGTTTTTCC GAAGACCGTA TGCTTTGGAG CCTTATAGCT GCTGATTATG AAATATTTAC CGTACCTGAA TTTTTGGTTA TACGCCACTT TGGTTATGAA GGAAATATCA CAAATAATCC TGCCAAAAAT TATAAATATA AAAAAGAGTT TATCAAAAAA TTTATATCTC AATTTTCGAA TAGTCTAAGT AAAAAAGACA TAATTGAATT TAAGCTATCA AATATGTATG ATTTTATGAC CGTTTTTTAT AAGAAAAAGG ATTATCATAA TTGTGTTGAA TGCTATACAG ATATGATAAG TACTTCATAT TCTACATTAT ATTATAAACG GTTTTACCCG CTTATTAAAT TTTTGGTTTC GTATGTTATG ACTGTTATTA AAAGTGAGAA GTAA
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Protein sequence | MYNSQHTIVR ALESIEVQSV LPEVVIIIDD GSKDQSISVV QAYKRDSSLN IKILTQNNSG PSSARNKGIN AASEFLISFL DADDEWHPLK IEKQLEFFLK KSQTSQVGLV ECYMTDVCGD IEIKRNTPTL SGHHFPDFIS SNVIKGTPCV MVPKHILESY GGFDESLRFS EDRMLWSLIA ADYEIFTVPE FLVIRHFGYE GNITNNPAKN YKYKKEFIKK FISQFSNSLS KKDIIEFKLS NMYDFMTVFY KKKDYHNCVE CYTDMISTSY STLYYKRFYP LIKFLVSYVM TVIKSEK
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