Gene Sfri_1324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1324 
Symbol 
ID4277998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1578972 
End bp1579385 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content43% 
IMG OID638134099 
Productglutathione-dependent formaldehyde-activating, GFA 
Protein accessionYP_750015 
Protein GI114562502 
COG category[S] Function unknown 
COG ID[COG3791] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTATTAC AAGGCGGTTG TTTATGCGGT GCGATACGTT ACCAAGTTAA CGGTATGCCA 
TTTGATGCCG ATCATTGCCA TTGTAATCAA TGTCGTAAAA GCGCTGGTGC GGTAGTAATG
AGTTGGATGG ATTTTCATCA TGAACAAGTG CAGTGGTTGC AGGGGCAAGT AAATGAATTT
GCTTCATCAG ATAACATTCG ACGTGGTTTT TGTCAGCGCT GTGGCTGTTC ATTGACTTAT
CGACATTTAG ATTACCCACA ATACACTTCA TTGTCGATAG CCTCTTTAGA CCAACCAAAC
CTAGTACGGC CGACTTATCA TATACACACT GACGAGCAGG TTAGTTGGTT AAAAATAGAT
GACTCTTGTC CGCGCTATCA GGCAGGTAAA ACAGCTGTTA AACAGCCTGA TTAA
 
Protein sequence
MVLQGGCLCG AIRYQVNGMP FDADHCHCNQ CRKSAGAVVM SWMDFHHEQV QWLQGQVNEF 
ASSDNIRRGF CQRCGCSLTY RHLDYPQYTS LSIASLDQPN LVRPTYHIHT DEQVSWLKID
DSCPRYQAGK TAVKQPD