Gene Sfri_1323 details

Gene Information

• Locus tag: Sfri_1323
• ID: 4277997
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 1578245
• End bp: 1578940
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 638134098
• Product: hypothetical protein
• Protein accession: YP_750014
• Protein GI: 114562501

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGTCAGTG ACGAGTTATT AATTAGCCCT TTTGCCAAAC GAAATGGCAT AACCTTAACG 
GTAGTTGGTG CCATTAGTTT AATGGCTAGC TTGATTATTT TTATCGGACT TAGCGGTTTT 
TTTGCCGTTG GAATGTTGTG CTTTGCATTA GGCTCCGTGG CATTTATTTT AGGTGTCGCT 
AAAGTGTATC AGCCAGCGGT TAGTTTTAAG CTAACTGCTG CAGGTGTGGC ATTTTTTCAT 
CGCCGCGGCC AAGTGTTTAT TGAATGGCAT AATATTCAAC GAGTTGATTG TGCGAGAGTA 
AATCAAAACT TGGAGTTGAT TGAGCTACCT TATATTGGCG TTAAGCTTAA GCAGATTAAT 
CCCATTTTAG ACTGTATTTC ACCTCGTCTT GCCACTGGTT TACTGACCGA ACAGCGGCCA 
TTACTCATGA CGGCGGCCAC CCAAGATGAA GATTTACAAA GTTTAGAAGG TTATTTGGGG 
GCTGAATTTA CGCCGCTAGT GGTAAACGGT GAGCGTTACC GTGGGGTATT GGCAATGTTT 
GGTCATCGCT GTCAAACGTT GAACGAACAG TTGGGTTACC ATGTGTATTT ATCGATTGAT 
AGTTTAGACC GAGAACCGAA AGAGTTTGTT GCCTTGTTGC GCCAATGGCA ACAGCAAGCC 
CTGCTGCATA CGGTATCGGC GACAGATATC GAATGA 

 

Protein sequence

MVSDELLISP FAKRNGITLT VVGAISLMAS LIIFIGLSGF FAVGMLCFAL GSVAFILGVA 
KVYQPAVSFK LTAAGVAFFH RRGQVFIEWH NIQRVDCARV NQNLELIELP YIGVKLKQIN 
PILDCISPRL ATGLLTEQRP LLMTAATQDE DLQSLEGYLG AEFTPLVVNG ERYRGVLAMF 
GHRCQTLNEQ LGYHVYLSID SLDREPKEFV ALLRQWQQQA LLHTVSATDI E