| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1300 |
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| Symbol | |
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| ID | 4278498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1542734 |
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| End bp | 1545946 |
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| Gene Length | 3213 bp |
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| Protein Length | 1070 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134075 |
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| Product | SNF2-related protein |
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| Protein accession | YP_749991 |
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| Protein GI | 114562478 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGCGA AACTGTTTAA TCTCCCCATT AAGCTTTCAT TAGAGATGAT TGCGAAACTG
TTTTCGGCCA CCCAAATTCA AAAAGCGCAA AACTATTTGA TCCAAGGTCG AGTTCTAGAA
GTTACTGCCA GCAGTAATAA TCATGATATT GAGGCCTATG TAGAAGGCTC TGCTGCTGAA
CCCTATCGTC AAGAAATCAC TCTGGTTAAT GTTAATCACA AAATTGTGAT GCGTTCACAT
TGTACTTGCC CTGTTAGAAC AAACTGCAAA CACGTAGCTG CTGCGATGCT GGCACTGGTC
GATAAAAAAC CGGTTGAAGA GCAACGTATC CACCAATGGT TACGCCAACT TGACGAGCAA
AAAACGGTTG CCGAATTTGA GGAAGAGGAC GAAGAAAAAG ATCGCATTAT TTATGTGTTA
TCCAATGATC CTCATGGTAT TTTTGTCGAA TTTAAACGCA GTAAATTAAA TAAAAAAGGC
CAATACAATA AAGGCAGCAA GCTGGCATTA GCCGATATTC GCTATAGTAT GCCGTGGTGG
ATAGACCCTG AAGATAAACA GATTATCAGC TTGTTACTGT CATCAAATAA TCATGGCTCT
AAAATTTATA TTGAAGGTGA GATTTCATTT TTAGCACTGA CTAAAATGCT CACAGCCGAA
GTGTGTTTTT GGGAAGAAAA CCGTATTCCC CTGACATGGG CTAAATCTGT TGTACCTGAA
TTTGTCTGGT GTGAAATTGA TAAAAAACAT ACCCAAATGC AAATGCGCAT GCCTGGGCTG
GATAATTGGG AGTTTATTGC TACCGAGCCA CCTTTGTATG TTGAATTAGA CTATTTGCAT
CTAGGTAGAA TAGAAACTGA TTTACCAGTT AAAAAGTTAA GTTTATTGCA ACACATGCCG
CCAGTGCCCT TGGCTCAAGT AGATGCCATT AGTCATAAAA TGCTCCAGCA TTTTTCACCT
AAAACGGTGC CTGTTCCTAG TGAAATTGAT TTTTGCGAGA TAACAGACTC ACTGTTAACA
CGCTTAACCT TTACGCGTGA GCTCATTGCC AACAACCCGA TTCTGCAACC GGTTATTCGT
GTTGATCATT GTTACGGTGA AATTACCTTT AATGCATCGA CTAAACCCGA ACGCATAAGC
TTAGTCAAAA AAAATCAAGT TCAATATCAA GTGCATAGAC ATGTCGAGCA AGAACTCGCG
GCATTACAGT CATTAGCGGA TATAGGCTTA GTGACGCTTG AGCCAGACGC TACGCTGGCC
AGTTCACAAC AACCCTATTA TGTCAGTGTC GGGTTATTAC CCGAGTCGAT TTTTGAATGG
TCTGAATTGA CCGAAAATGG TCTTGATGCA TTAACTGCCC TGGGGATGGA GATTCATTTT
GATGATGACT TCGACTTACA AATTACCGAT GCACAGTTAG ATGTCGACTT AGTTGACGAT
GATGAGTCTG GCTGGTTTTC ATTATCGCTC AGTGCCGACA TCGATGGCCA AAGTGTACCG
TTATTAGCCT TAGTTGCCCG TTGGTTGCAG CAAAATGGTG AGCCGGCAGA CGATGATGAA
TTGTTATTAC CTGGCCCTAA CGGTGGTTTT ATTAAAATAA AAGCCAAAAC CATTAAGCCG
CTGATTAGTA TTATCCAAGA ATTATTTAAT CGTCATTCTG GTGATGTCAT TTCGATACCA
CGCAACCGTG CGCATATTTT GAATGATTTA TCTGCCAGTG ACGTGCGTTT GCTTAATGGC
GAACGTGTGC GCAATTTAGC CGCCAAACTC GCAGAGTTTA AAGGGGTGGT TCCGGTTGAG
TTACCTGATG GCCTAAATGC GACATTACGT GATTATCAAA AACAAGGTTT TGACTGGTTG
TGTTTTCTTA AGGAATATCA ACTAGGTGGT ATTTTAGCCG ATGACATGGG CTTAGGTAAA
ACCGTACAAG CGTTGGCATT TTTACTCAAA GCCAAGCAAG ACGCTACCGA GCGTCGCACC
AGTTTAATTG TTTGCCCCAC TAGCTTAGTG GGGAACTGGT TAAAAGAAGC CAATAAGTTT
GCTCCGTCGC TGAATGTGGT GGTGATCCAC GGCAATAAAC GCCAACCTTT ATTAGATCAA
ATTAATCAGT TTGATGTGGT CGTGACAACC TATCCATTAA TGTTACGTGA TGAAGCCATT
TATTGTGAAT ATGTGTTTGA GCATATTATT TTGGATGAAG CACAACAAAT TAAGAATGCC
CAAGCAAAAG TCACCCAAGT GATTAAAACT CTAAGAGGTC GATTCCGCTT ATGTTTATCG
GGTACGCCGC TTGAAAACCA TTTAGGCGAA TTAAAATCAT TGATGGATTT TTGTTTGCCA
GGTTTATTAG GTCAGCATAC CTACTTTAAT AAGCAGTTCC GTGGTCCGAT TGAGAAGCAG
GCCGATGTTG AAAAGTCGCA GTTACTGAGT CAGCGTATTG CTCCCTTTAT GCTGCGCCGC
ACTAAAAAAG AAGTGGTGTC TGAATTACCT GAAAAAACCG TGATTATTCA AACTCTGGAA
CTTGAAAGAG ATCAACGTAA TTTGTATGAG TCTATCCGTT TAGTGATGGA GAAAAAATTG
CGTGAACTGT TTGCCAAGAA AGGGGTGTCG AGCAGTCATA TTGAGTTTTT AGATGCATTG
TTGAAATTAC GTCAAGCCTG TTGCGACCCA CGTTTAGTGA AGCTTGAACA AGCTCAACAA
GTTAAAGACA ACGCAAAAAT GACCTGGTTA ATCCAAAACC TGCCTGAAAT GATTGAAGAA
GGTCGTAAAA TCCTTATCTT CAGCCAATTT ACTGGCATGT TAGCGTTGAT TGAAGACGAA
CTAAAACGCT TAACAATTAG CTACAGTAAA TTAACGGGAC AAACTCGCGA CCGTCAAACC
CAGATTGATG CTTTTCAAGA GGGGGATAAC TCGGTGTTTT TGATCAGTTT AAAAGCGGGT
GGAACCGGGC TTAACCTCAC TGCCGCAGAC ACGGTTATTC ATTTTGACCC GTGGTGGAAC
CCTGCAGCGG AGCGCCAAGC GACCGATCGT GCTCATCGTA TTGGCCAGTT AAACCCGGTG
TTTGTTTATA AACTGATTGC CCAGGGCACC GTTGAAGAGA AGATTCAAGA AATGCAGCAG
CACAAACAAG GTTTGGCTGA CAGTATTTTA TCTGATGGGA CTCAAGGTCC ATGGCAGGGC
AGTGCGAACG ATTTATTAGC ATTGTTGAGT TAA
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| Protein sequence | MSAKLFNLPI KLSLEMIAKL FSATQIQKAQ NYLIQGRVLE VTASSNNHDI EAYVEGSAAE
PYRQEITLVN VNHKIVMRSH CTCPVRTNCK HVAAAMLALV DKKPVEEQRI HQWLRQLDEQ
KTVAEFEEED EEKDRIIYVL SNDPHGIFVE FKRSKLNKKG QYNKGSKLAL ADIRYSMPWW
IDPEDKQIIS LLLSSNNHGS KIYIEGEISF LALTKMLTAE VCFWEENRIP LTWAKSVVPE
FVWCEIDKKH TQMQMRMPGL DNWEFIATEP PLYVELDYLH LGRIETDLPV KKLSLLQHMP
PVPLAQVDAI SHKMLQHFSP KTVPVPSEID FCEITDSLLT RLTFTRELIA NNPILQPVIR
VDHCYGEITF NASTKPERIS LVKKNQVQYQ VHRHVEQELA ALQSLADIGL VTLEPDATLA
SSQQPYYVSV GLLPESIFEW SELTENGLDA LTALGMEIHF DDDFDLQITD AQLDVDLVDD
DESGWFSLSL SADIDGQSVP LLALVARWLQ QNGEPADDDE LLLPGPNGGF IKIKAKTIKP
LISIIQELFN RHSGDVISIP RNRAHILNDL SASDVRLLNG ERVRNLAAKL AEFKGVVPVE
LPDGLNATLR DYQKQGFDWL CFLKEYQLGG ILADDMGLGK TVQALAFLLK AKQDATERRT
SLIVCPTSLV GNWLKEANKF APSLNVVVIH GNKRQPLLDQ INQFDVVVTT YPLMLRDEAI
YCEYVFEHII LDEAQQIKNA QAKVTQVIKT LRGRFRLCLS GTPLENHLGE LKSLMDFCLP
GLLGQHTYFN KQFRGPIEKQ ADVEKSQLLS QRIAPFMLRR TKKEVVSELP EKTVIIQTLE
LERDQRNLYE SIRLVMEKKL RELFAKKGVS SSHIEFLDAL LKLRQACCDP RLVKLEQAQQ
VKDNAKMTWL IQNLPEMIEE GRKILIFSQF TGMLALIEDE LKRLTISYSK LTGQTRDRQT
QIDAFQEGDN SVFLISLKAG GTGLNLTAAD TVIHFDPWWN PAAERQATDR AHRIGQLNPV
FVYKLIAQGT VEEKIQEMQQ HKQGLADSIL SDGTQGPWQG SANDLLALLS
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