| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1268 |
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| Symbol | |
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| ID | 4277400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1500501 |
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| End bp | 1503074 |
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| Gene Length | 2574 bp |
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| Protein Length | 857 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134043 |
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| Product | PII uridylyl-transferase |
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| Protein accession | YP_749959 |
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| Protein GI | 114562446 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2844] UTP:GlnB (protein PII) uridylyltransferase |
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| TIGRFAM ID | [TIGR01693] [Protein-PII] uridylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACTG CGCTGGCCGC CAAAAACGCA TTAATTGACT TAAACCAGCG CTTAGTTGAG
CAGTACACTG CAAAACACCC TATTGCTGAT ATTGTTAAAC ACCGCAGTCA ATTTGTTGAT
GCTTTACTAA CACAAACTTG GCAAGATTTT GGCTTACATA ATAACCATCT TGCCTTAGTT
GCCGTTGGTG GCTATGGTCG TGGTGAATTG CATCCTTATT CAGATATTGA CTTACTTTTT
TTGGTCGACG ATGAACAACT ATCACCTGAG ACTGAAACTA AACTGGGTCA ATTCATTACT
TACCTTTGGG ATACTGGGCT TGAAATAGGC CACAGTGTCC GCACAATTGC GCAAACCATT
GAGCAAGGTA AAGCAGACAT CACCATTGCC ACAAATCTCA TTGAAGCCAG ATTGCTCACA
GGTAATGAAT ATCTATTTGA CGTGTTATAC GATGCTATTC GCCAACAAGA CTTTTGGCCC
TCTTATGACT TTTATAACGC CAAGAAAGAT GAACAAACTG CTCGCCATAG TAAAGCCAGT
GCCTTTGATT TAGAACCTAA CATTAAAACC TGCCCCGGCG GATTGCGTGA TATTCAAACC
ATCGCATGGG TCGCAATGCG CCACTTTGAT GCAGCTACGC TTGAAGAGCT TGTTGAACAC
GACTTTTTAT CACCAGCAGA ATTGGCAGAA TTAATTGAAT GCCAAAATTT TCTGTGGGAA
ATCCGTTTTG CACTTCACAT CACCGCTAAT CGCAACGAAA ACAGATTATT GTTTGATTTA
CAGCGACAAA TAGCCAGTTT ATTAGGTTAC GAAGATGCAA CTCAATTAGC CGTCGAACAA
ATGATGAAAC GCTACTATCG TACGGTTCGC CGGGTGATGG AGCTTAATCA AATGCTGCTG
CAATTGTTTA AGCGTGCAAC ATTAGGTCAC ACTCAAGCAC TAGAAATCCA GCCGATAAGT
GAGGCTTATC AACGTCGCGG GCGTTATATT GAAGTGTTAG ATGACGATTT ATTTAGCCGC
CAAAACGAAG AAATATTACG TTTATTTCTA CTGGTGGCGA AAAACTCTAA CATTCAAGAA
ATTTACGCGC CAACGTTACG ATTACTGCGC AATGCCCGTA GAGCTCTAAC ATCACCCTTA
CAAGAAAATC CCGCCTGTCG TAAAGTGTTT ATGGAGATAT TAAAACATCC CCGAGGTATT
ACCGCGCTTT CACTCATGCA TCAACACGGG ATTTTATCGT CTTACTTACC GGCTTGGCGC
AAGATTGAAG GCCAAATGCA GTTTGATTTA TTTCATGCCT ATACGGTTGA CGAACACACC
CATAGATTAC TGCTCAATAT TGACCGCTTT TCACAGGCTG AACAAAAAGA TGAATTTCCA
CTAGGCGCCA TCTTAATTAA TCAGTTGCCG AAAAAAGGCC TATTAGTCCT CGGGGCCATC
TTTCATGATA TCGCTAAAGG CCGTGGCGGC GATCACAGCA AATTAGGTTC AAAAGACGCC
ATCGATTTTT GTAAATTACA TGGCATGAAT GATCATGACG GTCGCTTAGT GGCTTGGTTA
GTTGAAAATC ACCTCGTGAT GTCAATCACC GCTCAGCGCA GAGATATTTC AGACCCTGAA
GTGATTGCAC TATTTGCTGA AAAAGTACGC GATGCAGCGC ACTTAAGTTA TTTATATTGC
CTCACAGTAG CCGATATTTG TGCCACTAAT GAGAAAACAT GGAATAACTG GAAAGGCTCG
TTATTACGCG ACTTGTATTT TTCAACTCAA CGAGTATTAG CTCGGGGAAA AGAAAAACCT
ATCGATGCTA AAGCACGCGT AAAAGAGATC CAAGCCAAAG CTAAAAAAGA ACTTATTCGT
CGTGGCCTCA AAGAAAAAGA CATGGATGAA CTCTGGTCTC GATTCAAATC TGACTATTTT
TTACGTCATC AGCCAACCCA AGTGGCTTGG CATGCAGAGG CTATTCTAAA ACATCATCAC
GACGAACCAT TAGTGTTAAT GTCTAAACAT ACAACGCGGG GTGGGACGGA GCTTTTTGTC
TATAGCAAAG ATAAACCAAA ACTGTTTGCC ACCGTCATGA CCGTTTTAGA CAACAAAAAT
ATCAATGTTC ATGACGCTAA TATCATGACA TCAAAAGATA ACTATGCACT CGACACCTTT
GTGATTTTAG AACAAGATGG CGAGCCAATT ATCCAATTGT CACGCATTCA AAGTATTCGT
AAAGCACTTG AAAAAGCCTT GGCCAGTGAA AATCCAAAAC TGCCGAAGTT TAGAAAACTA
GCCCGGATCA TGAAACCTTT TAATGTTGCG ACTCATGTGA GTTTCTTACC CAGTGCTCGC
CATGGTACAA GTATGATGGA ATTAATCACC CTCGATACCC CAGGCCTATT AGCCAAAGTC
GGTGATACGC TCTATCGTTG CAACGTGACA TTATTAGCAG CCAAAATTAC CACTATTGGC
GAACGTGCAG AAGATTTTTT CATATTACAA AACCAAAGTG GAACGGCCCT AGATGAGCCA
CAACAGCAAC AATTATCTGA TGCGCTAACA CTGGCGTTAA AATCATCTAA CTAA
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| Protein sequence | MNTALAAKNA LIDLNQRLVE QYTAKHPIAD IVKHRSQFVD ALLTQTWQDF GLHNNHLALV
AVGGYGRGEL HPYSDIDLLF LVDDEQLSPE TETKLGQFIT YLWDTGLEIG HSVRTIAQTI
EQGKADITIA TNLIEARLLT GNEYLFDVLY DAIRQQDFWP SYDFYNAKKD EQTARHSKAS
AFDLEPNIKT CPGGLRDIQT IAWVAMRHFD AATLEELVEH DFLSPAELAE LIECQNFLWE
IRFALHITAN RNENRLLFDL QRQIASLLGY EDATQLAVEQ MMKRYYRTVR RVMELNQMLL
QLFKRATLGH TQALEIQPIS EAYQRRGRYI EVLDDDLFSR QNEEILRLFL LVAKNSNIQE
IYAPTLRLLR NARRALTSPL QENPACRKVF MEILKHPRGI TALSLMHQHG ILSSYLPAWR
KIEGQMQFDL FHAYTVDEHT HRLLLNIDRF SQAEQKDEFP LGAILINQLP KKGLLVLGAI
FHDIAKGRGG DHSKLGSKDA IDFCKLHGMN DHDGRLVAWL VENHLVMSIT AQRRDISDPE
VIALFAEKVR DAAHLSYLYC LTVADICATN EKTWNNWKGS LLRDLYFSTQ RVLARGKEKP
IDAKARVKEI QAKAKKELIR RGLKEKDMDE LWSRFKSDYF LRHQPTQVAW HAEAILKHHH
DEPLVLMSKH TTRGGTELFV YSKDKPKLFA TVMTVLDNKN INVHDANIMT SKDNYALDTF
VILEQDGEPI IQLSRIQSIR KALEKALASE NPKLPKFRKL ARIMKPFNVA THVSFLPSAR
HGTSMMELIT LDTPGLLAKV GDTLYRCNVT LLAAKITTIG ERAEDFFILQ NQSGTALDEP
QQQQLSDALT LALKSSN
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