| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1246 |
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| Symbol | |
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| ID | 4277361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1476242 |
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| End bp | 1478233 |
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| Gene Length | 1992 bp |
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| Protein Length | 663 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134021 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_749937 |
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| Protein GI | 114562424 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2015] Alkyl sulfatase and related hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.12615 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAT CCCTCATAGC CATTTCAATG CTAACGACAC TTCCATTCAC TGTATTTGCA
GCTCAACATC AACACGACCA CATTAGTGTC GACTATTCAG GCAAGCCTGC TACACCCGTT
ACGGCGGCGC ATAATGCCGA AGTTGCAAAA GGCCTTAACT TTAACGATAA AACAGCCTTT
GACCGCTTTA GTCGAAACCA AATTGCTGAG TTCGACCAAG TAACCGCTGA CATTTTACGG
GCAGAATTTA GCTTTATCAG TGAACAATTT CCTGACTCGG TTAATCCATC ACTTTATCGT
CAAGCACAAC TTAATATGGT ACCCAACGGT TTATATAAAG TGACTGATGG TATCTACCAA
ATTCGTGGCA CTGACTTATC TAATATGACC TTGATTCGAG GTGAAACAGG CTGGATTGTT
TATGATGTAC TGTTAACAAA AGAAGCCGCA GAGCAATCAC TAAAATTTGC TTTTGAACAC
TTACCAGAAG GCAACAACTT ACCCATTGTA GCAATGATTT ATTCCCACAG TCATGCAGAT
CACTTTGGTG GAGCGCGCGG GGTTCAAAAC TTATATCCTG ACGTGAAAGT GTACGGTTCA
AATAATATTA CCGCTGAAAT AGTAGACGAA AATGTGCTTG CAGGTAATGC CATGAGTCGC
CGAGCCAGTT ACCAATATGG CGTAACACTG GGTAAAAATA ATCACGGTAT TATTGATGCA
GCATTGGCAA AAGGATTATC AAAAGGCGAA ATCACTTACG TAAAACCAGA TTATGAAATT
AATCAACAAG GACCATGGGA AACTCTGGTC ATTGATGGCC TAGAAATGGT CTTTATGGAC
GTGTCTGGTA CAGAAGCAGC AAGTGAAATG GTGACCTATA TTCCGTCAAA AAAAGCGTTA
TCGACGGCAG AGCTTACCTA CGATGGTATG CACAATATCT ACACCCTACG AGGTGCCAAA
GTACGCGATG CACTTAAGTG GTCTAAAAAT ATTAACCAAA TGATCAGCTC GTTCGGCCAA
GATGTTGAAG TGCTTTTTGC ATCGCATTCA GCACCGGTAT GGGGCAACGA ACAAGTAAAC
ACTTACCTTA AAATGCAACG CGATAACTAT GGTTTGGTCC ATAACCAATC ATTACGATTA
GCTAACCAAG GCGTAGTATT ACAAGATATT GGCAATGCGA TCATGAATAC TATTCCGCAA
GAGGTTAAGC AAACCTGGTA CACCAATGGC TATCACGGTA CTTACAGCCA TAATGCCAAA
GCAGTTTATA ATATGTATCT GGGTTATTTC GATATGAACC CTGCCAATCT GAATCCCTTA
CCCACAAAAA AAGAGTCGCT TAAGTTTGTT GAATACATGG GCGGCGCCAA CAAAGTGGTT
GAAAAAGCAC AAGCGGACTT TAACCAAGGT GATTACCGAT TTGTTGCCAC TGTATTAAAC
AAAGTCGTGA TGGCGGAGCC TAGTCATCAA CAGGCACGTG ATTTACTCGC CGATGCCTAT
GAGCAGTTGG GTTATCAAGC TGAAGGCGCA GGTTGGAGAA ACATCTATTT AACTGGCGCA
CAAGAGTTAC GCGTGGGTAT TCAACCAGGC GCACCTAAGT CGGCATCGGC TGATGTGTTG
GGTGAAATGG ATGTGACTAC ATTATTTGAT TTTCTTGCCG TAAAAGTCGA TAGCATAGCC
GCAGCTAAAC TTGGAAACGT CAGTTTAAAT GTGGTCACTA AAACTAAACA AGGTGACGTT
GAAACAACCA TATTCGTAGA GCTTAGCCAT GGAAACTTGA ACAATATTGT TGTTGACAGC
CCACAACCTG CCGATGCCAC ATTAACGATT GCCAAAACGG ATATGGTCAA CATGTTATTA
GGTAAAACAT CATTAAAACA ATTGCTACAA CAAGGTAAAG CTAACATGAC CGGCGACAAA
CAAGCTTTTG GCAAAATAGC CTCAACCTTA GTGCAGTTCA ATGACCAATT TGAAATTGTG
CCATTAAACT AA
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| Protein sequence | MKKSLIAISM LTTLPFTVFA AQHQHDHISV DYSGKPATPV TAAHNAEVAK GLNFNDKTAF
DRFSRNQIAE FDQVTADILR AEFSFISEQF PDSVNPSLYR QAQLNMVPNG LYKVTDGIYQ
IRGTDLSNMT LIRGETGWIV YDVLLTKEAA EQSLKFAFEH LPEGNNLPIV AMIYSHSHAD
HFGGARGVQN LYPDVKVYGS NNITAEIVDE NVLAGNAMSR RASYQYGVTL GKNNHGIIDA
ALAKGLSKGE ITYVKPDYEI NQQGPWETLV IDGLEMVFMD VSGTEAASEM VTYIPSKKAL
STAELTYDGM HNIYTLRGAK VRDALKWSKN INQMISSFGQ DVEVLFASHS APVWGNEQVN
TYLKMQRDNY GLVHNQSLRL ANQGVVLQDI GNAIMNTIPQ EVKQTWYTNG YHGTYSHNAK
AVYNMYLGYF DMNPANLNPL PTKKESLKFV EYMGGANKVV EKAQADFNQG DYRFVATVLN
KVVMAEPSHQ QARDLLADAY EQLGYQAEGA GWRNIYLTGA QELRVGIQPG APKSASADVL
GEMDVTTLFD FLAVKVDSIA AAKLGNVSLN VVTKTKQGDV ETTIFVELSH GNLNNIVVDS
PQPADATLTI AKTDMVNMLL GKTSLKQLLQ QGKANMTGDK QAFGKIASTL VQFNDQFEIV
PLN
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