| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1237 |
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| Symbol | |
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| ID | 4277352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1461760 |
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| End bp | 1464417 |
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| Gene Length | 2658 bp |
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| Protein Length | 885 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638134012 |
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| Product | hypothetical protein |
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| Protein accession | YP_749928 |
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| Protein GI | 114562415 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGCCGA CTTTGGGCTA TAACATTATG ATGTTTACGG TAATTACATT GTTATTAGGA
TGTAACACTG AGACAGCAAT TAAAGATCAA CAGCCTGATC CCGTTCTTGT TGAATATCCA
GTAGCTTATA TTGAGCGTAA TTTAACAGCG GTCGATCAAA ACCCTGCACA ATTTGAACCT
CTCAATCCAG GCCATTTTAA TCCTGGCGCT CAATTGCTCA TTAAACGTAA TGCCTTCGCT
GATTCACCTG CGACGAATTT AACCGCCGCC TTATTTGCTG AAGATCAGCT GATTGATATT
CGCGATCTGT CAGTGTCTGA CGATGGCCAA CAACTGCTTA TGGCCATTCG CGCACCAGAA
ATCGATGGTG TTGACGACGA TGAACAACCT AAATGGAATA TCTGGCGTTA TACAGTTGCT
AGCCAAACCT TAGAACGAAT TATCACGAGT GACATAACAG CTGAGCAAGG CAATGACCTA
ATGCCGGCGT TTTTGCCAGA CGGCAGAATT ATATTTGCAT CAACCAGACA ACGTTTATCT
CGCGCTATTT TGCTTGATGA AGGTAAACCA CAATACACAG CATTAGATGA AAGCCGTGCT
AATGAAACCT TTAACATCCA TGTAATGGAC CCAGACGGCA GCGCCATTAA GCAGTTAACC
TTTAACTTAA GCCATGACTT TTACCCATTG GTACTGCAAA GCGGAAAGAT TTTATACAGC
CGCTGGGATC GAATGGGCGG CGGCCATGGA ATTAACCTGT ACCGTATGAA TCCAGACGGA
ACAGAAAACG AATTAGTATT TGGCTGGCAT TCGCATCAAT TGCCCCTTGA CGGCCAAGCC
GAGCCGATAG ATTTCATCAA GCCACAACAA TTAGCTAGCG GCGAGATATT GATGTTGTTG
GCATCACAGG ATGACACCAG GATTCAAAAG CGTCCGGTGC TGATTAATAT TGATGACTAC
ATTGATGCTC AGCAAGCCAC TGCCAACTCT GGCGCGCAAG GCGAAGCGAT TACAGACGCC
ACGTTATCGG AGTTTAACTT CTCATTTTCT GCCACATTGT CAGAAAACGG TAGAATCAAT
CATTTATACC CACTACCCGA TAACAGCCAG CGCTTTTTAA TGAGTTGGGA TTTGTGTCGT
GTTGTTGTAA ATGACATCGT CCGTGCCTGC GGCCAACTCA CCGCGGAGCA ACTCGCTGAC
GACAATCTGA TTCAAGCCGA TCCATTATAC GAGTTATGGC TACTCAATAA TGCCAACAAT
ACTCAACAAT TAGTGGCCAC CACATCTCAA GGCACAGTGC TAACTGAATC TGTCGTAATG
CAACCAAGTG CACAACCAAA AACCTTTATC GCTGACAAGG TTGTCGGCAA CGAACTTGAT
TCGCAATTAA GCCAAGAGTT AGCCGGCTCG ATTCACATTC GTAGCGTTTA TGACTTTGAT
GGCGTTGACA GCACAACTAG CGCAGGCGGG TTAACTCTGC TTAGCGACCC GTCGCAAACA
CCCGCGGTAG ATTTGCCAGC ACGTTTTTTG CGTATCGTTC GTGGCGTTCC CATGCCACCA
GACGATGTTA GAGATATTGC CAATACAGAT TTTGGCCGCA GTAATAACCA ACTCATGCGC
GAAATTGTTG GATATAGTCC TATTCAACCC GATGGTTCAG TCAAAATAAA AGTGCCTGCT
AATGTCCCAT TGGCCATCAG TGTATTAGAC ATCAATGGTC AGCGTATTGG TGGACGCCAC
AGTCAATGGA TAACCTTAAC GCCGGGTGAA AACCTAGAAT GTACCGGTTG TCACACCGCT
AATAGTCAAC TGCCTCATGG CAGACTCGAC GCCCAAGCAG CCAGCATTAA TACCGGAGCC
GCGGGTGGTT CAGCCTACCC TAATACCACT AGCAATATCA TTCCTGAGCA AGGACAAACC
ATGGCCGAAG CCGATGAAAT GGTGAATGGC CTTGCCGAGC TTAGCGACAG CATCAAATAT
CAAGATATTT GGACTAACCC CGTATTGTCT GCCGTTAATC CAAATATTGA ATACAGCTAC
AGTAATTTAG CCACACCGGC ACCTAATGGC AGTGAATGCT TTGAAAATTG GACGCCCTAT
TGCCGCATTC AAATTAATTA TGTTGAACAT ATTCAACCGC TGTGGGACTT AGCTCGACCC
GTTATAGACG AGACAACTCA AATGATCGTT GCCGATAACA CTTGTACCAG TTGCCATAAT
ATCGTCGATG TAGATGGCGC AGCGCAAGTA CCAGCGGGAC AGTTGTCGTT AATCAATTCA
CCTTCAGGCG ATCAAGCCGC ACACTTAACC TCATACCGTG AATTGCTGTT TAACGACGTT
GAGCAAGAAG AAGTCGACGG TATTTTAATC GATAAATTAG TTGAAGTGCT CGATGCCGAT
GGCAACGTAG TTTATCAAGT AGACAGTAAT GGTGAACTTA TTCTCGACGC AGACGGTAAC
CCTATTCCAG TGTTAACCAC AGTCAATGTA CCCGCTGTTT TATCGACTAA TGGTGCTCGC
TCAAGCAGTA CTTTTTTTGA AGTGATGAGT AACACCACCC ATCAAAATAT GCTGTCGGCA
GATGAGCTCA AATTACTCAA CGAATGGCTA GACATTGGCG CGCAATATTA CAACACGCCA
TTTTACTCAC AAGACTAA
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| Protein sequence | MRPTLGYNIM MFTVITLLLG CNTETAIKDQ QPDPVLVEYP VAYIERNLTA VDQNPAQFEP
LNPGHFNPGA QLLIKRNAFA DSPATNLTAA LFAEDQLIDI RDLSVSDDGQ QLLMAIRAPE
IDGVDDDEQP KWNIWRYTVA SQTLERIITS DITAEQGNDL MPAFLPDGRI IFASTRQRLS
RAILLDEGKP QYTALDESRA NETFNIHVMD PDGSAIKQLT FNLSHDFYPL VLQSGKILYS
RWDRMGGGHG INLYRMNPDG TENELVFGWH SHQLPLDGQA EPIDFIKPQQ LASGEILMLL
ASQDDTRIQK RPVLINIDDY IDAQQATANS GAQGEAITDA TLSEFNFSFS ATLSENGRIN
HLYPLPDNSQ RFLMSWDLCR VVVNDIVRAC GQLTAEQLAD DNLIQADPLY ELWLLNNANN
TQQLVATTSQ GTVLTESVVM QPSAQPKTFI ADKVVGNELD SQLSQELAGS IHIRSVYDFD
GVDSTTSAGG LTLLSDPSQT PAVDLPARFL RIVRGVPMPP DDVRDIANTD FGRSNNQLMR
EIVGYSPIQP DGSVKIKVPA NVPLAISVLD INGQRIGGRH SQWITLTPGE NLECTGCHTA
NSQLPHGRLD AQAASINTGA AGGSAYPNTT SNIIPEQGQT MAEADEMVNG LAELSDSIKY
QDIWTNPVLS AVNPNIEYSY SNLATPAPNG SECFENWTPY CRIQINYVEH IQPLWDLARP
VIDETTQMIV ADNTCTSCHN IVDVDGAAQV PAGQLSLINS PSGDQAAHLT SYRELLFNDV
EQEEVDGILI DKLVEVLDAD GNVVYQVDSN GELILDADGN PIPVLTTVNV PAVLSTNGAR
SSSTFFEVMS NTTHQNMLSA DELKLLNEWL DIGAQYYNTP FYSQD
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