| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1090 |
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| Symbol | |
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| ID | 4277624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1288828 |
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| End bp | 1290153 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638133864 |
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| Product | serine/threonine protein kinase |
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| Protein accession | YP_749781 |
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| Protein GI | 114562268 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGCAAA CACTGCAACA ATTAAATGAT GGTTTGTTAC TGGGTTATCA ACGAGTCAAT
ATCGCAGAAC AACTGACGGA GTTTCCTGTA AAACTGTTTG AGTTAGCCGA TACTCTAGAA
GTACTCGATC TTAGCAATAA CCAATTATCG TCATTGCCCG ATAACTTTGC TGACTTGCAT
CAACTCAAAA TCTTGTTTGT GTCGAATAAC CTATTTGAAC ATCTACCAGC CGTATTAGGC
CAGTGTCCAA AGCTCGAAAT GATAGGTTTT AAAGCCAATC AAATTCGCAC CGTACCCGAA
ACATCCATTC CAAAGCAAAC TCGTTGGTTA ATATTAACCG ATAACCACAT TGAGCAGTTG
CCAGACAGTT TAGGTCAGTG TCATCGTCTG GAAAAACTCG CGTTAGCGGG TAACCGATTA
ACCGCACTGC CTAATAGTAT GGCTAATTGT CATCAATTGG CTCTTATCCG TTTATCGGCT
AACCAGCTTA CCGCCTTACC ATATTGGTTA TTTGAGCTAC CTAACTTAGC CTGGTTGGCT
TTTGCAGGTA ACGCGTTTAG TCATGTAGAA CATTGCGATA ATACTCGCGT ACCTATAGTG
CCATTAACCC AGTTTACGTT AGGTCAGTTA CTCGGGCAGG GCGCATCTGG ATTAATTTAT
CAAGCAACTC ACCATACAGA AAGCTCAGTT GACACAAGCT TTAGCAGCGA CGCTGATGTC
GCAATTAAAT TGTTTAAGGG CATGGTAACC AGTGATGGTT ATCCAGCAGA TGAGCTTGAT
TGTTGCTTAA CCGCTGGCGA GCACCCTAAT TTGATTAATG TGGTGGCACA AATTAATCAA
CCAGAACAAC TGGGTTTAGT GATGCAACTT ATTCCACCAA GCTACGGTAA TTTAGGTTTA
CCGCCGTCGT TGCAAACCTG TAGCCGTGAC ACTTTTGAAG CGCAAACGGT ATTTACCTGG
GCGCGCATTA CTCATATTGC CAGCCAAATG GCTGATATTT TGGCTCATTT ACACCAAAAT
GGTATAAGCC ATGGTGATAT TTATGCCCAC AACATCATGA TAAATACCCA CGATAACGTG
CTGTTTGGTG ATTTTGGCGC CGCCTCAAAT TTAAAGCAGT TCACCCCACA GCATTTGCAA
TTAATGCAAG CTATTGAGAT TAGGGCGTTT GGTTATTTGG TCGATGACAT GCTAAACCTC
ATCGATAACC CAGACACACC ACAAGCGGCA ATGTTGCGCC AGTTAGTGCA AGATTGCTTG
CAGCACAGTT CATCAACCAG ACCGACTTTT AAAGCGCTGT TACCACGTTT AGCGAGCATT
GCTTAA
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| Protein sequence | MMQTLQQLND GLLLGYQRVN IAEQLTEFPV KLFELADTLE VLDLSNNQLS SLPDNFADLH
QLKILFVSNN LFEHLPAVLG QCPKLEMIGF KANQIRTVPE TSIPKQTRWL ILTDNHIEQL
PDSLGQCHRL EKLALAGNRL TALPNSMANC HQLALIRLSA NQLTALPYWL FELPNLAWLA
FAGNAFSHVE HCDNTRVPIV PLTQFTLGQL LGQGASGLIY QATHHTESSV DTSFSSDADV
AIKLFKGMVT SDGYPADELD CCLTAGEHPN LINVVAQINQ PEQLGLVMQL IPPSYGNLGL
PPSLQTCSRD TFEAQTVFTW ARITHIASQM ADILAHLHQN GISHGDIYAH NIMINTHDNV
LFGDFGAASN LKQFTPQHLQ LMQAIEIRAF GYLVDDMLNL IDNPDTPQAA MLRQLVQDCL
QHSSSTRPTF KALLPRLASI A
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