| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1000 |
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| Symbol | |
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| ID | 4278374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1169967 |
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| End bp | 1171229 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638133768 |
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| Product | nucleoside transporter |
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| Protein accession | YP_749691 |
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| Protein GI | 114562178 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1972] Nucleoside permease |
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| TIGRFAM ID | [TIGR00804] nucleoside transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000184803 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATATAG TAATGAGTTT AGTAGGGGTG GTCACCTTAC TATTGATAGG TTTTGCACTA
TCAAACAATA GAAAAGCAAT TAACGTACGT ACTGTCGGTG GTGCTTTATT AATTCAAGCA
TTCTTCGCTG GTTTTGTTTT ATATGTTCCA GTCGGTAAAG ATATACTGAA AGGTGTTTCT
GATGCGGTAT CAAGTGTTAT TAGTTATGCA CAAGCAGGTA CCAGCTTCTT ATTTGGTGAT
TTAGCTAACT TTAAAGTTGG TTTTATTTTT GCCATTAACG TATTACCTGT CATTATTTTC
TTCTCTTCTC TAATTGCAGT GCTTTACTAT TTAGGCATTA TGCAGTGGAT CATCCGTATT
ATCGGTGGTG GACTACAAAA AGCATTAGGC ACTAGTCGTA CAGAATCTAT GTCAGCTACA
GCGAATATTT TCGTTGGACA AACAGAAGCA CCATTAGTTG TGCGTCCGTT TATTGCGACA
ATGACTCAGT CTGAGTTATT CGCAATCATG GTTGGTGGCT TAGCATCAAT CGCTGGTTCT
GTATTAGCTG GTTACGCTCA AATGGGTGTT CCAATTCAAT ACTTAGTAGC AGCGTCATTC
ATGGCAGCAC CAGGTGGTCT ATTAATGGCT AAACTGATGC ACCCTGAAAC AGAAGCTTCT
ATCAACGAAA TGGAAGATTT ACCAGATGAC CCAGATAAGC CAGCAAACGT GTTAGATGCT
GCTGCTTCAG GTGCTGCATC AGGTATGCAT CTTGCATTGA ACGTTGGTGC TATGTTGATC
GCATTCGTTG GTTTAATTGC AATGATCAAC GGTATCATCG GTGGCGTAAC AGGTTGGTTT
GGTTTAGAAG GTATTACTCT AGAACTTATC CTTGGTTATA TCTTTATGCC TCTTGCTTTC
TTAATCGGTG TACCTTGGAA CGAAGCACTT GTTGCTGGTT CTTTCATCGG TCAAAAGATT
GTTGTTAACG AATTTGTTGC TTACTTAAAC TTCGCTCCGT ATCTACTTGA TGCATCTGCT
GAAGGCTTCA AAGTAGTAGC TGAAACAGGC GCAATGATGT CTGACCGTAC TAAAGCAATT
ATCTCTTTTG CTTTGTGTGG ATTCGCTAAC TTATCTTCTA TTGCAATCTT ACTTGGTGGT
TTAGGTGCTA TGGCTCCTGC ACGTCGCCAT GACCTTGCAA AATTAGGTAT CCGTGCTGTT
ATCGCTGGTT CATTAGCTAA CTTAATGAGC GCGACATTAG CCGGTTTATT CTTAGCTATC
TAA
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| Protein sequence | MDIVMSLVGV VTLLLIGFAL SNNRKAINVR TVGGALLIQA FFAGFVLYVP VGKDILKGVS
DAVSSVISYA QAGTSFLFGD LANFKVGFIF AINVLPVIIF FSSLIAVLYY LGIMQWIIRI
IGGGLQKALG TSRTESMSAT ANIFVGQTEA PLVVRPFIAT MTQSELFAIM VGGLASIAGS
VLAGYAQMGV PIQYLVAASF MAAPGGLLMA KLMHPETEAS INEMEDLPDD PDKPANVLDA
AASGAASGMH LALNVGAMLI AFVGLIAMIN GIIGGVTGWF GLEGITLELI LGYIFMPLAF
LIGVPWNEAL VAGSFIGQKI VVNEFVAYLN FAPYLLDASA EGFKVVAETG AMMSDRTKAI
ISFALCGFAN LSSIAILLGG LGAMAPARRH DLAKLGIRAV IAGSLANLMS ATLAGLFLAI
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