Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0961 |
Symbol | |
ID | 4277759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 1120087 |
End bp | 1121166 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638133727 |
Product | DNA polymerase IV |
Protein accession | YP_749652 |
Protein GI | 114562139 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.215034 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTAAAA TCATTCACAT CGATATGGAT TGTTATTTTG CCGCGGTAGA AATGCGCGAT TTTCCTGAGT TGAGAGGAAA ACCCATTGCT GTTGGCGGCA GAAGTGACCG CCGAGGTGTG ATAAGTACCT GCAGCTATGA GGCCCGCAAA TTTGGGGTGC GTAGCGCTAT GTCCAGTTAT CATGCGTTGC AGTTGTGTCC GCAATTGATT TTAGTACCAG GGCGGATGGA AGTGTATAAA TCGGTGTCAC TGCAAATACG TGAGATTTTT CATCGATACA CTGATCTTGT TGAGCCTTTG TCTTTGGACG AAGCGTATCT TGATGTGACT GATTGCGATG CTCACCAAGG CAGTGCGACA TTAATTGCCA AGACGATACG AGATGAGATT TTTGAGGTTA CCGGATTAAC TGCTTCAGCT GGTATAGCAC CCATTAAGTT TTTAGCCAAA ATTGCATCCG ATTTAAATAA GCCGAATGGA CAATATGTTA TCACTCCAAA TCAAATTGCT GATTTTGTAA AAGACCTACC GCTGAGTAAA ATTCCTGGAG TTGGTAAAGT CACTTCAAAA AAGTTAGCCG ATATTGGCTT AACCACTTGT TATGATGTGC AGCAATACCC TAAAGTGCAA TTAATTGAGG CCTTTGGTAA GTTTGGCCAT GTGTTGGCTG AGCGTGCTCA AGGGATCGAT TCAAGACAAA TTAGCCCGCA TCGAGTGCGT AAGTCTGTCG GGGTTGAAAC GACATTAGCC AAAGACATTT TTACGTTAGA GCAATGTCAT CAGGTATTAC CGCAACTGAT TCAAGAGCTG AGTACTCGGG TTCGTCGCAG TGCAAAAGAC CGACAGATCC ATAAGCAGGT TGTGAAACTG AAATTTAATG ATTTTAAGCA GACCACCATC GAGCATCGCA GTGATGAGAT TTCGATTAAC CTGTTTCATG AGTTATTGCT GCAAGCATTA CAACGAAGCC AAGGGCGAGG GATTCGATTA GTCGGTGTGA GCGTTGGCCT AGCGGATGTG ACGTTGGCTT CTTCCGAGAG TAGTGTCGAT CAAATTACTC AACTCGATTT ACAATTTTAG
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Protein sequence | MRKIIHIDMD CYFAAVEMRD FPELRGKPIA VGGRSDRRGV ISTCSYEARK FGVRSAMSSY HALQLCPQLI LVPGRMEVYK SVSLQIREIF HRYTDLVEPL SLDEAYLDVT DCDAHQGSAT LIAKTIRDEI FEVTGLTASA GIAPIKFLAK IASDLNKPNG QYVITPNQIA DFVKDLPLSK IPGVGKVTSK KLADIGLTTC YDVQQYPKVQ LIEAFGKFGH VLAERAQGID SRQISPHRVR KSVGVETTLA KDIFTLEQCH QVLPQLIQEL STRVRRSAKD RQIHKQVVKL KFNDFKQTTI EHRSDEISIN LFHELLLQAL QRSQGRGIRL VGVSVGLADV TLASSESSVD QITQLDLQF
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