| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0660 |
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| Symbol | |
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| ID | 4278181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 769532 |
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| End bp | 770752 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638133417 |
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| Product | ATP-dependent RNA helicase SrmB |
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| Protein accession | YP_749358 |
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| Protein GI | 114561845 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATTTG AAGATTTCCA GCTCGACCCT AGCTTATTAG AGTCACTCAA GGCCATGGGA
CACAACACCC CTACCACTAT TCAGCAGCAA ACTATTCCAT TGGCCATGGA TCAGCGGGAT
ATTTTAGCGC GTGCGCCAAC CGGCACCGGT AAGACAGCCA GTTTTTTACT GCCTGCTTTA
CAGCACCTTA TTGACTTCCC ACGTCGTTTT GAAGGCCAAG CACGCATTTT GGTGCTAACG
CCAACACGTG AATTAGCCAG TCAAATTCAT CGTTATGCAA GCCATTTAGC CACTGGGCTT
GAGCTTAATA TCGCCATTAT TACTGGTGGT GTGCCATATG GTCCACAAGA AGAAGCACTT
GCAGACAATG TTGATTTATT GATCGCCACC CCTGGTCGAT TAATGGAATA CCTAGATAAA
GACAAATTTG ACGCCACTGA AGTTGAAATT TTAATTATTG ATGAAGCTGA CCGTATGCTT
GATATGGGTT TCTCATCAGT AGTGCAATCA ATTGCCATTG AAGCTCAAGG CCGCAAACAG
AACATGCTGT TTTCTGCCAC GCTTGAAGGT AATGGGGTTA ACCGTTTCGC TCGCGACTTA
TTAACCGATC CAGTAATGGT CGATGTTGAA GCGCCACGCA GTGAAAAAGC CAAAGTACAC
CAGTGGGTTC ACTTGGCTGA CGATCAAGCA CATAAATTTG CGTTGTTATG TCATATTCTT
CAACAAGAAA ATGTTACACG CACCATTGTG TTTGTTAAAA CTCGCGAAAT GGTTGCCAGC
CTTGAAGGTT TATTGCTAAA AGCGAATATC CCATGTGCAT TTATGCGTGG CGATATGGAG
CAGAAAAAAC GCTTCCAAGC ACTGGGTCGT TTTTCTAAAG GCGAAGTTAA TGTGCTTTTG
GCGACGGATG TTGCAGCTCG AGGAATCGAT GTTGATGATA TTACTCATGT GATTAACTTT
GACATGCCAC GTTCTGCTGA CGCGTATGTT CATCGAATTG GCCGTACTGC GCGCGCGGGC
GCAAAAGGAA CAGCGATTTC ATTAGTTGAA GCGCACGATA TGCGTATTGT GTCTAAAATT
GAACGTTACA TTGAGATCCC ACTGAAACGC CGTGTGATTG AAGAACTTCG CCCTAAACAC
AAAGAAGCTA AAGTGCCTGG TAAGAAAAAA GCCAATGCAA AAGATGCTCG AGTTAAATCG
AAAAAATATA AGAAAAAGTA A
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| Protein sequence | MQFEDFQLDP SLLESLKAMG HNTPTTIQQQ TIPLAMDQRD ILARAPTGTG KTASFLLPAL
QHLIDFPRRF EGQARILVLT PTRELASQIH RYASHLATGL ELNIAIITGG VPYGPQEEAL
ADNVDLLIAT PGRLMEYLDK DKFDATEVEI LIIDEADRML DMGFSSVVQS IAIEAQGRKQ
NMLFSATLEG NGVNRFARDL LTDPVMVDVE APRSEKAKVH QWVHLADDQA HKFALLCHIL
QQENVTRTIV FVKTREMVAS LEGLLLKANI PCAFMRGDME QKKRFQALGR FSKGEVNVLL
ATDVAARGID VDDITHVINF DMPRSADAYV HRIGRTARAG AKGTAISLVE AHDMRIVSKI
ERYIEIPLKR RVIEELRPKH KEAKVPGKKK ANAKDARVKS KKYKKK
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