Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0508 |
Symbol | |
ID | 4278588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 575637 |
End bp | 577280 |
Gene Length | 1644 bp |
Protein Length | 547 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638133266 |
Product | sigma54 specific transcriptional regulator, Fis family protein |
Protein accession | YP_749207 |
Protein GI | 114561694 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAT CACAATTAGA TCTTCGTGAA CTCCTAGCAT TTAAACCTCG TGGCGGCACG ATGAGCTTTC TTGGTCAGAG AACTTACCTC ACCGATATGG TGTCCCATGG AATACTCAGA AAAGAGTTAC TCAGCACCGT CGATTCTAAC GTCACTCGCA CAATAATTAC TCGTTCAGGT TTCATTAGAG GATGGTTATT AGCGGAACAA ATAAAACGTA AAATGCCTGA AGTATGGTCA GAAGCAAGAC AGGGGAAACT AGGCCCAATG GTTTGTTCTA TGTTTGGCTT TGGCGAGGTG CTTACGAGTC ATCGCACCGA TGGCCTGTCA GGCGCACCAC TGGTTGAAAC TTACTTTATC GGTTCCTATG AAGCAGAACA GCAACTACGT TTAAGTGGCC AATCTCAAGA TGTAGTTTGT TGGGAACAAG TTGGATTCGC GAGTGGCTAT GTTTCTCACG TTCAGCAACG TACGGTCTAT TTCATTGAGT CAGAATGCCA AGCTAAAGGT GATTGCCACT GTCACCTTAT CGGAAATTAT GCCGAAAAAT GGACTGAAAA AGACACTCTT TCACTCCATT ATTATAATGG TATCAACATA GAAAATATTA AAACCGAAGT AGAAGAAATA TTAAAAATAG AAGAATATTT CCCACGAAAT GTTCATTCTA ATATTGATCT AGACACTCCA AATGATTATG TCCAAAGTGG CTATCCCATT ATCAATAGTT ATCCGATGAA AAAACTCATT GAAATGGCCA TTAACGTCGC CAAAGTACCC ACATCTATTT TTGTCACTGG CGAAAGTGGT GTCGGCAAAG AGAAATTAGT TGATTTTATT CATCGCCTCT CCGATAGAAA TAATAAACCG TTACTGGCGA TAAACTGCGG TGCACTAACT GAATCTCTAT TAGACAGTGA ACTATTTGGT CATGTAAAAG GCGCGTTTAC AGGGGCTGAA AATAACAAAA TGGGATTGAT CGAAAGTGCC AACGGTGGAA CACTATTCCT CGATGAAGTC GGCGAACTTT CTCCCTCAAT GCAAACTAAA CTACTGCGAG TGATTCAAGA AAAACAAATT CGCCGAGTGG GTGACAACAA TATCAAAGAT GTCGATGTTC GAATAATATC GGCAACCAAT AAAGATTTAG AAGCTGCGGT TGAAGCAGGT GATTTCCGTC AAGACCTTTA CTACCGACTC AATGTTATCG AACTCAAAAT CCCTCCACTA AGGAATCGAG GAGAAGATAT TTTACCCTTA GCGCGCTGTT TTCTGTCCGA TTTCAATGAA AAACTGGGTA GAAAAATCAC TGGTTTTAAC TACAAAACAG CAGATTTATT ACTCAACTAC GACTGGCCAG GCAATATTCG TCAACTCGCC AATACGATTG AACGGGCGGT AGTGTTAAGT CCCGGGCCAC AGATTATGCC TGAAGACTTA CCAGAAGAAT TTCATCAAAA TATCACTAAA CCATCGATAA ATAATGGTAT TAAACCACTT AATACCATTG AAAAAGACTA TATAGTCTCG GTATTAGAAA CCCTAAATAA TAACAAAGCA CTCACAGCCA AAAAACTCGG AATGAGCCTC GCGACCCTAT ATCGAAAGTT GAAAGAATAT GATGAACTTC AAAATTTCGA TTAA
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Protein sequence | MKTSQLDLRE LLAFKPRGGT MSFLGQRTYL TDMVSHGILR KELLSTVDSN VTRTIITRSG FIRGWLLAEQ IKRKMPEVWS EARQGKLGPM VCSMFGFGEV LTSHRTDGLS GAPLVETYFI GSYEAEQQLR LSGQSQDVVC WEQVGFASGY VSHVQQRTVY FIESECQAKG DCHCHLIGNY AEKWTEKDTL SLHYYNGINI ENIKTEVEEI LKIEEYFPRN VHSNIDLDTP NDYVQSGYPI INSYPMKKLI EMAINVAKVP TSIFVTGESG VGKEKLVDFI HRLSDRNNKP LLAINCGALT ESLLDSELFG HVKGAFTGAE NNKMGLIESA NGGTLFLDEV GELSPSMQTK LLRVIQEKQI RRVGDNNIKD VDVRIISATN KDLEAAVEAG DFRQDLYYRL NVIELKIPPL RNRGEDILPL ARCFLSDFNE KLGRKITGFN YKTADLLLNY DWPGNIRQLA NTIERAVVLS PGPQIMPEDL PEEFHQNITK PSINNGIKPL NTIEKDYIVS VLETLNNNKA LTAKKLGMSL ATLYRKLKEY DELQNFD
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