Gene Sfri_0487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0487 
Symbol 
ID4278551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp553006 
End bp553707 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content49% 
IMG OID638133245 
Producthypothetical protein 
Protein accessionYP_749187 
Protein GI114561674 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.791512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGTA CACTAGTGAC TGCAAGTCTT ATGGCTGCTG GATTATTTAG CCTTCCAACG 
TTGGCAGCGG ATATTGAAGT TAGCGTGACC AATTTAACTC ACGGAAATCA CTTCACCCCT 
ATTTTGATCG CAGCCCACGA CGCTGACAGC CACCTATTTC AAGTCGGAAC TGAAGCATCC 
GCAGCCTTAC AAAAAATGGC TGAAGGCGGC GACATTGCCG ACTTAGATGC TGCGGTAACC 
GGCAATGCAG GCGTCACATC AGCAAATCCT GCAACGGGGT TACTTGCCGC AGGTGCAAAT 
GTTAGTGGCG TAATGCTTGA TACTGGCGAC AACACCCATT TATCTATCGT AGCTATGGTG 
TTACCCACTA ACGATGCTTT TATGGGGCTA GATGGTTGGG AAATCCCTAC TGAAGCGGGC 
ACGTACACTA TGTACGTCAA TGCTTATGAT GCTGGCACAG AAGCCAATGA TGAAATCATC 
AATGGCGGCG GCATGTCAGG CGTACCGGGT ATTCCTGCAG CACCAGGTGG TGACGGTGGA 
GCTAATGGCA CTGGCGTGAT GGATAACTCT GACAATAGCA ATGTACATAC TCACCCTGGC 
GTTTTAGGTG ACATGGACCC TGCTGGTGGA ATGAGTGATT TAGACAGTCG CGTTCATCGC 
TGGTTGAATC CTGTAGCCAA AGTTGTGGTG ACAGTAAAAT AA
 
Protein sequence
MKRTLVTASL MAAGLFSLPT LAADIEVSVT NLTHGNHFTP ILIAAHDADS HLFQVGTEAS 
AALQKMAEGG DIADLDAAVT GNAGVTSANP ATGLLAAGAN VSGVMLDTGD NTHLSIVAMV 
LPTNDAFMGL DGWEIPTEAG TYTMYVNAYD AGTEANDEII NGGGMSGVPG IPAAPGGDGG 
ANGTGVMDNS DNSNVHTHPG VLGDMDPAGG MSDLDSRVHR WLNPVAKVVV TVK