Gene Sfri_0359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0359 
Symbol 
ID4277603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp387473 
End bp388165 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content44% 
IMG OID638133113 
ProductTPR repeat-containing protein 
Protein accessionYP_749060 
Protein GI114561547 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGATAG CCATGAAAAC TTTACTACTG ATCACCAGCT TAACCTTAGT CAGCCACACT 
AGCTTTGCTA ACATTAGCGA TATTGATGCT GCAGCCAACA CAATGAACAT CACTGAGCTT 
AGTCAATACA GTGAACAGGC TATTGATTAT GAAAAAGCCT ATGCTGATTA TCGCCTAGCC 
ATCACAGCCA ACATCATCGG CCAACGTCAA CTCGCTACAG ATTCATTAAA CAATGCTCAG 
CACACACTAG AATCCCTTTT AGTCCAAGAT CCATCTGCAG ACCAGCAAGC TCTACTTGCT 
GCGGTATACG GAATGCAAAT CTCGTTTGAT AATAGTAAAG GTACTGTATT AGGAATGAAA 
ACGGCGCAAT TACTGCAACA AGCAAACGAT CTCGAACCTA ACAATCCGCG AGTCAGCTTA 
GTGCGAGCAA TTAATGCATT TTATACCCCA AGCGTATTTG GTGGCGGCCT CGACAAGTCG 
CAAACATTAG CAACCCAAGC AATTAATCAA TTTGAGCAGC CTTGTAACGA AATCTGTTGG 
GGACATGCAG AAGCCTATAC TTGGCGCGGA CTAGCGAAAC AAGAACAAGG CGACTTAAAA 
GGGGCTTTAC AAGATTGGCA AACCGCCATT GAGGTTGACC CTCAGTATGG TTGGGCAACC 
TATCTGTTAA ACCAACAAAC AGTAAAGCAG TAA
 
Protein sequence
MEIAMKTLLL ITSLTLVSHT SFANISDIDA AANTMNITEL SQYSEQAIDY EKAYADYRLA 
ITANIIGQRQ LATDSLNNAQ HTLESLLVQD PSADQQALLA AVYGMQISFD NSKGTVLGMK 
TAQLLQQAND LEPNNPRVSL VRAINAFYTP SVFGGGLDKS QTLATQAINQ FEQPCNEICW 
GHAEAYTWRG LAKQEQGDLK GALQDWQTAI EVDPQYGWAT YLLNQQTVKQ