Gene Sfri_0344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0344 
Symbol 
ID4277152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp373114 
End bp373929 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content46% 
IMG OID638133098 
Producthypothetical protein 
Protein accessionYP_749045 
Protein GI114561532 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGCCC GCAGCAGAGT ATTTGTGAGC CTATTTACTA GCATATTTAT TAGTGTATTG 
GCGCGAGTAA GCAGCATCAT TATGCTGTGT TGCCTGTGTA TTGCGGCCAC CTCGGCGAGC
GAACATCCAC CAGCAAGTAA TAATGAACCG CTTACTCAAG CGCAATTGGC AGATATTCAG
GCGTTGTATA CTCAACCAGC CAGCACAGAA GCCCTCAACG CGCTAGCGCA GCAACTGAAT
CTACAACTAG ATACTCGTGG TCAATTTGTT CAACTACGCT ATTTACAGGT GCTTAAAAAG
CCCTTGCTCA GTCAAGGACA GTTTATATTT AGTCCAACCC AAGGGTTGGT ATGGCAGCAG
CAGCGTCCAT TCAATACCTT GATGGTGCTT AAAGATCAGC AGTTGATCCA ACAAAACAGC
CAAGGCAAAA TTCAACACTT TAGCGCAGGG GCTAATGGCA ATCCGATTGC ACAGCAATTA
CCGCGTTTAT TACAAGCCAT TATGGCGGGT GATATTGACG CCTTAAGTGC CGATTTCAGC
TTATTCATGC TTGCAACTCA ATCCATAAAT AAGCCCGAAA CTCAGCCCGC AGATAAGTCA
TGGCAACTGG GCTTACAAGC TAAAGACCCA CAAGTGCAAT CGTCTATGGG TAACATTACC
CTCAGCGGCG ATACCCTTAT ACGTTCATTA ATCATGACCA GTAACCAAGC GAATGTTCGC
GACTATACCC AAATTCAATT TACCCAGACC CAACAAGGGC CACTAAGTGA AGCAGAGCTG
GCACTTTTTA GTCTTGGCAA TGAGTCAGCT AAATAA
 
Protein sequence
MSARSRVFVS LFTSIFISVL ARVSSIIMLC CLCIAATSAS EHPPASNNEP LTQAQLADIQ 
ALYTQPASTE ALNALAQQLN LQLDTRGQFV QLRYLQVLKK PLLSQGQFIF SPTQGLVWQQ
QRPFNTLMVL KDQQLIQQNS QGKIQHFSAG ANGNPIAQQL PRLLQAIMAG DIDALSADFS
LFMLATQSIN KPETQPADKS WQLGLQAKDP QVQSSMGNIT LSGDTLIRSL IMTSNQANVR
DYTQIQFTQT QQGPLSEAEL ALFSLGNESA K