Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0344 |
Symbol | |
ID | 4277152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 373114 |
End bp | 373929 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638133098 |
Product | hypothetical protein |
Protein accession | YP_749045 |
Protein GI | 114561532 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGCCC GCAGCAGAGT ATTTGTGAGC CTATTTACTA GCATATTTAT TAGTGTATTG GCGCGAGTAA GCAGCATCAT TATGCTGTGT TGCCTGTGTA TTGCGGCCAC CTCGGCGAGC GAACATCCAC CAGCAAGTAA TAATGAACCG CTTACTCAAG CGCAATTGGC AGATATTCAG GCGTTGTATA CTCAACCAGC CAGCACAGAA GCCCTCAACG CGCTAGCGCA GCAACTGAAT CTACAACTAG ATACTCGTGG TCAATTTGTT CAACTACGCT ATTTACAGGT GCTTAAAAAG CCCTTGCTCA GTCAAGGACA GTTTATATTT AGTCCAACCC AAGGGTTGGT ATGGCAGCAG CAGCGTCCAT TCAATACCTT GATGGTGCTT AAAGATCAGC AGTTGATCCA ACAAAACAGC CAAGGCAAAA TTCAACACTT TAGCGCAGGG GCTAATGGCA ATCCGATTGC ACAGCAATTA CCGCGTTTAT TACAAGCCAT TATGGCGGGT GATATTGACG CCTTAAGTGC CGATTTCAGC TTATTCATGC TTGCAACTCA ATCCATAAAT AAGCCCGAAA CTCAGCCCGC AGATAAGTCA TGGCAACTGG GCTTACAAGC TAAAGACCCA CAAGTGCAAT CGTCTATGGG TAACATTACC CTCAGCGGCG ATACCCTTAT ACGTTCATTA ATCATGACCA GTAACCAAGC GAATGTTCGC GACTATACCC AAATTCAATT TACCCAGACC CAACAAGGGC CACTAAGTGA AGCAGAGCTG GCACTTTTTA GTCTTGGCAA TGAGTCAGCT AAATAA
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Protein sequence | MSARSRVFVS LFTSIFISVL ARVSSIIMLC CLCIAATSAS EHPPASNNEP LTQAQLADIQ ALYTQPASTE ALNALAQQLN LQLDTRGQFV QLRYLQVLKK PLLSQGQFIF SPTQGLVWQQ QRPFNTLMVL KDQQLIQQNS QGKIQHFSAG ANGNPIAQQL PRLLQAIMAG DIDALSADFS LFMLATQSIN KPETQPADKS WQLGLQAKDP QVQSSMGNIT LSGDTLIRSL IMTSNQANVR DYTQIQFTQT QQGPLSEAEL ALFSLGNESA K
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