| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0310 |
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| Symbol | |
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| ID | 4277205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 339162 |
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| End bp | 340562 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638133064 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_749011 |
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| Protein GI | 114561498 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.445983 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAAAAA ACAATCCATT TAACGGGCTA TTTTTTAAAT TATTGTTAGG CTTTTGGCTA
TGCAGTTCAT TGATTATTGC ACTGGTGTCT TTATTGCCAT TACTGCAACA AAACCATGAT
CGTTCACCAT TACCTCCCAG TCTTGAGCGA GTACTTAAAA GCGTTGCAAA ACGAATACAA
GAGCAACCTC AATTACTCGA AGGTAAAAAT CTTCAACGTC TGCACCGTAG CCGCAATAAA
CAAGGCGATA GAAACCATAA TGCTGGTCCA TTGCGCTTAT ATTTAACCGA TGGCGAAGGC
CAAGTATTAA ATACCAAACG AGTATCGCGA GGATTTAGAC GCTTTCAACT CATGGCAGAA
GAAGCAGACC ATCCGATCAG CCATCAATTT AGAGATGAAC TTATTTTCGG CCCCTATTCT
TTTGTGGTCA ATGGCAAGCC GTATCAATTA TTTGGCCGCT TCCCCGATAA TCATCCACGG
CCGTGGTTCT TTTTCTTTGC CGACAATAAA TTACTTACTG CAGGCTTAGC CATTTTACTG
TCTGGCTTAT TATGCGGTTT GCTCGCATGG TATTTGGGTA AACCATTACG TTCGCTAAAG
CACAGTGCCA ATGCCCTCGC TAGAGGTGAT TTATCTAGCA GAGTCGATGC CGCTACCGCA
AATCGTCGTG ATGAAATGGG CCAATTGGCA CAGGCTTTTA ATGGAATGGC CGATGCAGTG
CAAGCCATGA TTAACAACCA GCAACGATTA ATGGGTGATA TTTCTCATGA ACTGCGCACA
CCACTCACTA GGCTGCAATT AGCCTTAGCT TTAGGCCGTA AAAAAGGGCA GCAAAGTGAA
GAGCTAGAAC GTATCGGCTA TGAAGCCTTA CAACTTGAAG CGCTAATAAG CGAGTTACTC
ACTCTATCTC GGGTAAGCTT AGCCAGCCAT GAAAATAAAG TCGTACTCGA ATTAGCAGAA
TCTTTAAGCC AAGTGTTAGA TGACGCCGAA TTTGAAGCCG AGCAGCAAGG CAAACTATTA
CAAATTGATA TACCAGAGGC ACTGCAATTG CCTCTTCACC CAAAGACACT CTCGCGCGCC
ATAGAAAATC TGCTGCGTAA TGCAATTTGC TATGCCAATA GCCAGATAAC CATTAGTGCA
GCCCAAGTTG GCAAACACAT ATTAATTACA GTGGAAGACG ACGGTCCAGG TATAGATCCA
AAAGAGCTCG AAGCTATTTT TAAGCCTTTC TATCGCCCCG ATACAGCCAG AGACAGGCAA
AGTGGTGGGT GGGGTTTAGG GTTGGCTATA ACTCAAGCTG CTATTACGTT ACATCAAGGC
AGTATTGTGG CAGAAAACCT TATCGGCCCA ACAGGAAAGC GCGAAGGCCT TAAGCTCAGT
ATCAGTTTAC CGGTTAGCTA G
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| Protein sequence | MLKNNPFNGL FFKLLLGFWL CSSLIIALVS LLPLLQQNHD RSPLPPSLER VLKSVAKRIQ
EQPQLLEGKN LQRLHRSRNK QGDRNHNAGP LRLYLTDGEG QVLNTKRVSR GFRRFQLMAE
EADHPISHQF RDELIFGPYS FVVNGKPYQL FGRFPDNHPR PWFFFFADNK LLTAGLAILL
SGLLCGLLAW YLGKPLRSLK HSANALARGD LSSRVDAATA NRRDEMGQLA QAFNGMADAV
QAMINNQQRL MGDISHELRT PLTRLQLALA LGRKKGQQSE ELERIGYEAL QLEALISELL
TLSRVSLASH ENKVVLELAE SLSQVLDDAE FEAEQQGKLL QIDIPEALQL PLHPKTLSRA
IENLLRNAIC YANSQITISA AQVGKHILIT VEDDGPGIDP KELEAIFKPF YRPDTARDRQ
SGGWGLGLAI TQAAITLHQG SIVAENLIGP TGKREGLKLS ISLPVS
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