Gene Sfri_0231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0231 
Symbol 
ID4278664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp256270 
End bp256950 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content37% 
IMG OID638132985 
Productputative integral membrane protein 
Protein accessionYP_748932 
Protein GI114561419 
COG category[S] Function unknown 
COG ID[COG3647] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAAA ATATTATGGA ACATAAACGA TACTTTCTAA TCCTTTCAGT TATCTTTGGC 
ATTGAATTCC TAGTTATTTC TATATCGCCT CATGACCGAG CCGATTGGGC GCTTGAGAAT 
GTATTAGTTG TCTTATCTGC TATTTTCATT TTTTTTACGT ATAAGAAATG CCCATTATCG 
CGACTCTCTT ATAGTTTGAT ATTTGCCTTT ATGAGCTTGC ATGAAATAGG TTCATATTAT 
ACTTATTCCA ATGTTCCCTA TGATGCATTT TTAACGTCGT ATTTTAACTT TAGCCTTAAT 
GAATGTATGG GCTGGACCAG GAATAATTTT GATAGATTGA TTCATTTGGC ATACGGTCTT 
TTATTGGCAT ACCCGGTTAG GGATTTGTAT TGTCGAATTG CTGGTTTGAA AGGCTTTTGG 
AGCTATTTAA CGCCTTTAAA TCTTATTATG GCAACATCGA TGCTATATGA ATTGATTGAG 
TGGGGCGCCG CCGAGACATT TGGTGGCGAG CTAGGAATGG CGTATTTAGG CACACAGGGA 
GATGTTTGGG ATGCACATAA AGATATGGCC CTGGCAAGTC TTGGCGGTTT TATAGCTATG 
GCGATAACCC TTTTTATCCA TTCACGTATT CAAAAAGACT TTCGAGAGCA ATGGAAATTA 
AGCTTAACAG TAAAAAAATA A
 
Protein sequence
MAKNIMEHKR YFLILSVIFG IEFLVISISP HDRADWALEN VLVVLSAIFI FFTYKKCPLS 
RLSYSLIFAF MSLHEIGSYY TYSNVPYDAF LTSYFNFSLN ECMGWTRNNF DRLIHLAYGL 
LLAYPVRDLY CRIAGLKGFW SYLTPLNLIM ATSMLYELIE WGAAETFGGE LGMAYLGTQG 
DVWDAHKDMA LASLGGFIAM AITLFIHSRI QKDFREQWKL SLTVKK