Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0122 |
Symbol | |
ID | 4277192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 134619 |
End bp | 136475 |
Gene Length | 1857 bp |
Protein Length | 618 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638132863 |
Product | phospholipid/glycerol acyltransferase |
Protein accession | YP_748823 |
Protein GI | 114561310 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.430079 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCTAA CTAAACGATT TTTTCCCTAT TTTGCGACCT TATGCTTAGG GGCGCTTAAT GACAACTTTT ATAAAAATGT GTTGCTCTTG TTAGTGACGT ACAGCCAATT AAATGCATTA CCGATTGATG TTAACTTGTT TGTTAATTTG GCCGCTGGCG TATTCATTTT ACCTTTTTTC TTGTTTTCTG CTCATGCTGG TATCGTGGCT GACAATATGA ATAAGGCAAA ATTGATTCGA CGGTTAAAGT TGTTAGAGCT GATTATCATG TCGACAGCGG CTATCGCTAT TATCAGTCAG AGTTATATGG TGATGTTGCT GCTGCTATTT TTAACCGGCA GCCAGTCTGC ATACTTTGGT CCAGTAAAAT ACTCATTATT ACCTCAAGCC CTAAGCGAAG CAGAGTTAGT GAAAGGGAAT GCTCTGGTTG AAATGGGCAC TTTTTTGTCG ATTCTTGTTG GTACCCTAAG CGCCGGTTTG GTGGTGTCTA ATGAAAATGG TTTAACGTGG GCTGCAATCA TTGTCTGTGT GTTGGCGATT TGTGGTTATC TTGCTAGCCG TGCGATTCCT TCATTGCCTG CCCAAGGTGA TTTAAACCCT AGCAAGTTTT CGTTATTTTC TGGCACTTGG CGTTGTATCA ATAAAGCGCG ACAAACCAAG ACTATTTGGA TGGCCATTCT CGCCATTAGT TGGTTTTGGT TCTTAGGGGC CACCTATTTG ACTCAATTTC CAAATTTTGC CAAGTTGCAT TTACATGCAG ATGCTACTGT TGTTTCATTG TTACTGGCGT TATTTTCTGT CGGTATTGCG GTTGGGTCAT ACGTGTGTGA ACGTTTTTCG TTTGGGCATG TTGAGTTAGG CTTATTACCA TTTGGGGTAT TGGGCTTGAG CGTGTTTAGT TTTGACATGA TAGCGGCTAT TCCGCTTGAG CTTGTTGAAC CTGGTTTTGT GTATAGCTTC GAGTCATTTA TCGCTAACGC GCAGCATTAT CGTGTGATGA TCGATTTGTT TCTTGTCGGC CTAAGTGGCG GGATATTCAT TGTGCCACTG TATGCGTTTA TTCAAACTCG TGCAGAAAAA CAAGAATGTG CTCAAGCTAT TGCGGCGAAT AACATCATTA ATGCCTTCTT TATGGTGGGC TCTGCAGTAT TATCGATAGT GTTGCTTGGG GTATTTCAGT GGAGTATCCC TGAATTATTT ATGCTTGTCG GCGTGCTTAA TTTGGTTGTG CTGTTATATG TTTACTCGCA AGTGCCAGAG TTTACCCAAC GCTTTATCAG TTATTTGCTG AGCCATGTTA TGTATAGGGT GAATGTACGA GGTAGAGAAC ATATTCCGGC ACAAGGGGCA GGAATTATTG TCAGTAATCA TGTGAGTTAC GTTGATGCGT TAGTCATTAT GGGCGCATCG ACTCGACCTA TTCGGTTTGT AATGGATAAG TCTATTAGCG AAATTCCATT ATTAAAGTAT TTGTTTCGGC ACGCTGGCGT TATCCCAATC TGTTCACCTA AAAAGTGTGA GTCGACATAT CTAAATGCAT TTGAACAGAT ACACCAAGCA TTAGCTAACG ATGAGTTAGT GTGTATTTTT CCGGAAGGGA AGTTAACTCC AGACGGTGAA ATTGGTGAGT TTAGACCTGG CATTGATAAA ATTTTACAAC GGGATCCTGT GACGGTAATA CCGTTAGCGT TAACAGGGTT ATGGGGATCT TACTTTAGCC ATAAAGGTGG GCATGCACTG ACCACTTTTC CTAAACGTTT CTGGTCTAAA GTATCGGTGA GTATTGCACC TTCAGTTGAC GGAGCTACGA CCAATTGCAA AGCGTTACAG CAGCAGGTGA CTCAGCAATT TAATTAG
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Protein sequence | MLLTKRFFPY FATLCLGALN DNFYKNVLLL LVTYSQLNAL PIDVNLFVNL AAGVFILPFF LFSAHAGIVA DNMNKAKLIR RLKLLELIIM STAAIAIISQ SYMVMLLLLF LTGSQSAYFG PVKYSLLPQA LSEAELVKGN ALVEMGTFLS ILVGTLSAGL VVSNENGLTW AAIIVCVLAI CGYLASRAIP SLPAQGDLNP SKFSLFSGTW RCINKARQTK TIWMAILAIS WFWFLGATYL TQFPNFAKLH LHADATVVSL LLALFSVGIA VGSYVCERFS FGHVELGLLP FGVLGLSVFS FDMIAAIPLE LVEPGFVYSF ESFIANAQHY RVMIDLFLVG LSGGIFIVPL YAFIQTRAEK QECAQAIAAN NIINAFFMVG SAVLSIVLLG VFQWSIPELF MLVGVLNLVV LLYVYSQVPE FTQRFISYLL SHVMYRVNVR GREHIPAQGA GIIVSNHVSY VDALVIMGAS TRPIRFVMDK SISEIPLLKY LFRHAGVIPI CSPKKCESTY LNAFEQIHQA LANDELVCIF PEGKLTPDGE IGEFRPGIDK ILQRDPVTVI PLALTGLWGS YFSHKGGHAL TTFPKRFWSK VSVSIAPSVD GATTNCKALQ QQVTQQFN
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