Gene SeSA_A3918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3918 
Symbol 
ID6519029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp3789891 
End bp3790982 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content39% 
IMG OID642748891 
ProductUDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase 
Protein accessionYP_002116654 
Protein GI194737924 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0109965 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGACTT CATTGAAAAT AGCATTTATA GGCGAAGCGG TATCTGGTTT TGGAGGGATG 
GAAACCGTTA TTAGCAACGT TATCCATACG TTTGAAAATA GCTCTCCGAA AATCAACTGT
GAAATGTTTT TCTTTTGTCG TAATGACAAA ATGGATAAAG CATGGCTAAA AGCGATTAAA
TATGCGCAAT CATTCTCAAA TATAAAATTA AGTTTTCTTC GTCGAGCTAA GCATGTTTAT
AATTTTAGTC AGTGGCTGAA AGAAACGTCA CCGGATATTG TGATATGTAT TGATGTCATC
TCATGTCTTT ATGCCAATAA AGCACGAAAG AAAAGTGGTA AACAGTTTAC TATTTTCTCG
TGGCCGCATT TTTCGCTCGA CCATAAAAAA CATGCAGAAT GTATAACGTA CGCAGATTAT
CATCTGGCCA TCAGTAGTGG TATTAAAGAA CAGATGATGG CACGGGGTAT CTCAGCGCAA
AATATTAGCG TCGTTTATAA TCCTGTCTCT ATTAAAACAA TCATTGTGCC GTCGCCTGAG
CGCGATAAAC CCGCTGTATT TCTCTATGTA GGGCGTCTTA AATTTGAAGG ACAGAAAAGA
GTTAAAGATT TATTTGATGG CTTAGCTCGT ACGACAGGGG AATGGCAGCT ACATATTATT
GGTGATGGCT CAGATTTTGA AAAGTGCCAG GCCTATAGTC GGGAGCTTGG TATTGAGCAG
CGTGTGATCT GGTATGGTTG GCAAAGCGCG CCGTGGCAAG TCGTACAGCA AAAAATAAAA
AATGTCACCG CGTTACTACT TACCTCTGCG TTTGAGGGAT TTCCTATGAC CCTGCTGGAA
GCAATGTCAT ATGGAATTCC GTGTATTAGT TCTGATTGTA TGTCTGGTCC GCGCGATATG
ATTAAACCCG GTTTGAATGG TGAGCTTTAC ACCCCGGGGG CTATAGATGA TTTTGTAGGA
CACCTTAATC GTGTTATTTC TGGTGAAGTA AAATATCAGC ATGATATTAT TCCCGGCACG
ATTGAGAGAT TTTACGATGT GCTATATTTT AAAAATTTTA ATAATGCAAT ATTCTCGAAA
TTACAAAAGT GA
 
Protein sequence
MVTSLKIAFI GEAVSGFGGM ETVISNVIHT FENSSPKINC EMFFFCRNDK MDKAWLKAIK 
YAQSFSNIKL SFLRRAKHVY NFSQWLKETS PDIVICIDVI SCLYANKARK KSGKQFTIFS
WPHFSLDHKK HAECITYADY HLAISSGIKE QMMARGISAQ NISVVYNPVS IKTIIVPSPE
RDKPAVFLYV GRLKFEGQKR VKDLFDGLAR TTGEWQLHII GDGSDFEKCQ AYSRELGIEQ
RVIWYGWQSA PWQVVQQKIK NVTALLLTSA FEGFPMTLLE AMSYGIPCIS SDCMSGPRDM
IKPGLNGELY TPGAIDDFVG HLNRVISGEV KYQHDIIPGT IERFYDVLYF KNFNNAIFSK
LQK