Gene SeSA_A3548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3548 
Symbol 
ID6516700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp3421997 
End bp3423265 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content53% 
IMG OID642748534 
Productanion transporter 
Protein accessionYP_002116304 
Protein GI194735885 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0471] Di- and tricarboxylate transporters 
TIGRFAM ID[TIGR00785] anion transporter 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.6918 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCCA TTACCCTTAC CCTATGTTTA TTGGTGTTCG CTATCGTCAT GTTTGTATGG 
GAAAAAGTGC CGCTGGCCGT CACTTCCATG ATTGTCTGCG TGGCCTTAGT TATCACCGGC
GTTCTGAATA TCAAACAGGC CTTTGCTGGC TTTATCGACA CTAACGTCAT CCTCTTTGTC
GCGATGTTTA TCGTGGGCGG TGCGTTGTTC GAGACCGGTA TGGCAAACAA AGTGGGCGGC
GTCATCACGC GCTTCGCGAA AACAGAAAAA CAGCTGATCT TCACCATTAT GGTGGTGGTG
GGTTTGATGT CTGGCGTCCT CTCTAACACC GGTACCGCTG CGGTTTTGAT TCCGGTGGTG
ATCGGCGTGG CGGCAAAATC GGGCTTCTCG CGTTCTCGTC TACTGATGCC GCTGGTTTTC
GCCGCTGCGT TGGGCGGTAA CCTGTCGTTA ATTGGCGCGC CGGGAAATCT TATCGCGCAG
TCTGCGCTAC AGAATATTGG CGGCGGCTTT GGCTTTTTTG AATACGCAAA AATCGGTCTC
CCGATGCTCA TCTGCGGCAT TCTCTACTTC CTGACTATTG GCTATCGCTT TCTGCCGAAT
AATGCGACCG GCGGTGAGGT GGGGAGCGTC GGGGAGCAAC GTGACTACAG CCATGTTCCA
CAGTGGAAAC AACGGCTCTC ACTCGTGGTG TTGATCGCAA CGATCCTCGG CATGATCTTT
GAGAAGAAGA TCGGTGTCAG CCTGGCCGTG ACCGGTTGTA TTGGCGCTCT GGTGCTGGTA
GTAAGCGGCG TACTCACGGA AAAACAGGCC TATAAAGCCA TTGATTCACA GACTATTTTT
ATCTTTGGCG GCACCCTGGC GCTGGCAAAA GCGCTGGAAA TGACCGGGGC AGGCAAGCTG
GTTGCGGACT ATGTAATCGG CATGCTGGGG CAAAACTCCT CACCGTTCAT GTTGCTGATC
GCCGTTTTCG CCTTATCCGT TGTGATGACC AACTTTATGT CCAATACCGC AACGACAGCG
CTGTTGGTGC CGGTGAGTTT GTCCATTGCC GCAGGTATGG GGGCCGACCC GCGTGCGGTT
CTGATGGCGA CGGTCATTGG CGGTTCCTGC GCCTACGCAA CCCCTATCGG TATGCCTGCC
AACATGATGG TGCTCTCTGC GGGTGGCTAT AAATTTGTCG ACTACGCTAA GGCCGGTATC
CCCCTGATTA TCGTTTCAAC CATTGTCAGC TTGATCCTGC TGCCAATCCT TTTCCCTTTT
CATCCGTAA
 
Protein sequence
MEPITLTLCL LVFAIVMFVW EKVPLAVTSM IVCVALVITG VLNIKQAFAG FIDTNVILFV 
AMFIVGGALF ETGMANKVGG VITRFAKTEK QLIFTIMVVV GLMSGVLSNT GTAAVLIPVV
IGVAAKSGFS RSRLLMPLVF AAALGGNLSL IGAPGNLIAQ SALQNIGGGF GFFEYAKIGL
PMLICGILYF LTIGYRFLPN NATGGEVGSV GEQRDYSHVP QWKQRLSLVV LIATILGMIF
EKKIGVSLAV TGCIGALVLV VSGVLTEKQA YKAIDSQTIF IFGGTLALAK ALEMTGAGKL
VADYVIGMLG QNSSPFMLLI AVFALSVVMT NFMSNTATTA LLVPVSLSIA AGMGADPRAV
LMATVIGGSC AYATPIGMPA NMMVLSAGGY KFVDYAKAGI PLIIVSTIVS LILLPILFPF
HP