Gene SeSA_A2178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2178 
Symbol 
ID6516162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp2068560 
End bp2069438 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content44% 
IMG OID642747249 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002115042 
Protein GI194737349 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.0263296 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTTA ACCAGCTTAA AACATTTGTT ACCGTTGCGG AAACCGCCAG CCTGACTCGC 
GCAGCAGGAC TTCTCTACCT AAGTCAACCA GCGGTAAGCG CCCATATAAA GCAACTTGAA 
ACCGAGTTCA ATGTAAAGCT ATTCAAACGC ACCCCCAGAG GCATGGAGCT GACCTCTACA 
GGTCTCATCA TGAGAGATGA AGCACGTCTT GCACTTGATG CCGCAAACAA ATTTGTAAAT 
AAAGCCCGTA CACTTCATAA TATAGAGAAC TGTGCCTTAG GCACTATTTC AGTTCCAGTA 
ATCCTTAATC TACCATTAGT ACTATCACAA CTACGGCTGC GGCACCAGAA TGTCAGTTTG 
ACGATCCAGC AGAATATTTC GGGGTATATT ATTGAAGACA TTAAGAACGG TAAGCTCGAT 
GCTGGCTTTG TCATTGGGGA AGTTAATGAC TCTCAGTTAG GGATTATTCC TGTTTCTTCT 
GTAACGCTCT GCCTTGTAGG TCCATGGGCC TGGAAATCCC AGCTTGAAAA AGCAGGTTGG 
GAGCAACTAC AGGAGTTACC CTGGATTGCT ACCCCAGAAA AATGCTCCTT TACTGCTATA 
ACAAAGTCTT TCTTTGAACG ACATGATGTC ACTGTAAAGG CATCCATTAT AGTTGATCAG 
GAAAAAACGC TAGCTGAATT GGTAGTAATG GGAGCAGGGA TAACTCTGAT GAGAGAAGAT 
ATCGCTCTAG CTCTTCAGGA TAATGAGGAG ATTTATATCT GGCCGGGAGA AAAGACAGTG 
AGCCAGCTTT GTTTCCTTTG GGATCGTGAA AAAGAGAAAT CTTCTGTCTT ATCTGCACTA 
ATTGCAACGG TGAAAGATAT CTGGCAAGTG CCAGCTTGA
 
Protein sequence
MDLNQLKTFV TVAETASLTR AAGLLYLSQP AVSAHIKQLE TEFNVKLFKR TPRGMELTST 
GLIMRDEARL ALDAANKFVN KARTLHNIEN CALGTISVPV ILNLPLVLSQ LRLRHQNVSL 
TIQQNISGYI IEDIKNGKLD AGFVIGEVND SQLGIIPVSS VTLCLVGPWA WKSQLEKAGW 
EQLQELPWIA TPEKCSFTAI TKSFFERHDV TVKASIIVDQ EKTLAELVVM GAGITLMRED 
IALALQDNEE IYIWPGEKTV SQLCFLWDRE KEKSSVLSAL IATVKDIWQV PA